{"id":"W3181464471","doi":"10.1099/mgen.0.000585","title":"Comparative genomic insights into the epidemiology and virulence of plant pathogenic pseudomonads from Turkey","year":2021,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Erciyes Üniversitesi","keywords":"Biology; Pseudomonas syringae; Virulence; Pseudomonas fluorescens; Pathovar; Comparative genomics; Microbiology; Pseudomonas; Botany; Genetics; Bacteria; Pseudomonadaceae; Genome; Genomics; Gene; Pathogen","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000127676,0.0004021421,0.0002975772,0.001563881,0.0001898819,0.0003268191,0.0002282445,0.0003405324,0.0006006091],"category_scores_gemma":[0.0002946016,0.000201331,0.0004413707,0.00104375,0.0001832753,0.0001744653,0.0003316325,0.0003469637,0.0002407744],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004363143,"about_ca_system_score_gemma":0.0002276746,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003157533,"about_ca_topic_score_gemma":0.003317067,"domain_scores_codex":[0.9997757,0.00001987867,0.00002059988,0.00008433692,0.00003673657,0.00006274683],"domain_scores_gemma":[0.9997777,0.00003324746,0.00008898805,0.00001229582,0.0000428392,0.00004491291],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008696723,0.0001041237,0.07771132,0.0002195662,0.00008699771,0.0008539867,0.0006707929,0.000527608,0.9047782,0.0001695074,0.0001727004,0.01383553],"study_design_scores_gemma":[0.00001544987,0.0003749234,0.9785147,0.00002781043,0.00008945404,0.001748195,0.0006937628,0.0006601507,0.0156853,0.00006702137,0.00210787,0.00001541577],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978276,0.0003336439,0.0004794034,0.00001907202,0.000004509136,0.00001335189,0.0008293343,0.00001256389,0.0004805929],"genre_scores_gemma":[0.9947298,0.0003043515,0.001264693,0.00004207036,0.000004814784,0.00001335344,0.003329318,0.00001041867,0.0003010215],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003157533,"threshold_uncertainty_score":0.006278276,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03334127407514395,"score_gpt":0.2241907612240017,"score_spread":0.1908494871488578,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}