{"id":"W3181686680","doi":"10.3390/microorganisms9071459","title":"Evolution of Pig Fecal Microbiota Composition and Diversity in Response to Enterotoxigenic Escherichia coli Infection and Colistin Treatment in Weaned Piglets","year":2021,"lang":"en","type":"article","venue":"Microorganisms","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Université de Montréal","keywords":"Biology; Lachnospiraceae; Feces; Enterotoxigenic Escherichia coli; Microbiology; Gut flora; Diarrhea; Microbiome; Antibiotics; Weaning; Lactobacillus; Escherichia coli; Immunology; Animal science; Bacteria; Firmicutes; 16S ribosomal RNA; Medicine; Internal medicine; Enterotoxin","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002362867,0.0002948677,0.0003920698,0.000286958,0.0001682536,0.0002939574,0.0001474744,0.0006380037,0.0006174124],"category_scores_gemma":[0.0003414562,0.0002052573,0.0002774627,0.0001286872,0.0002843617,0.0002778507,0.0001580444,0.0005282533,0.0001749367],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002971825,"about_ca_system_score_gemma":0.000169579,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008119062,"about_ca_topic_score_gemma":0.001204247,"domain_scores_codex":[0.9998145,0.00002866811,0.00001257269,0.00007043715,0.0000307156,0.00004321068],"domain_scores_gemma":[0.9997824,0.00003331439,0.00007716829,0.00001653754,0.00002721395,0.00006348897],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001414883,0.0002395233,0.01793122,0.00003530056,0.00002055944,0.0002949634,0.0001326724,0.00005719517,0.9771705,0.00001075393,0.00003587921,0.002656702],"study_design_scores_gemma":[0.00002723401,0.008024797,0.9105431,0.00001462527,0.0000551304,0.0005132202,0.0004162735,0.0003604597,0.07920227,0.00003745492,0.0007832068,0.00002223462],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994724,0.0001250987,0.0001300214,0.00001939024,0.000007408272,0.000009744789,0.0000982071,0.000003883777,0.0001338188],"genre_scores_gemma":[0.9969938,0.0002639719,0.0004554911,0.0001276044,0.0000089578,0.00004456556,0.0004240162,0.000005984859,0.001675677],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008119062,"threshold_uncertainty_score":0.002156258,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009291427176836136,"score_gpt":0.2402203291997062,"score_spread":0.2309289020228701,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}