{"id":"W318444599","doi":"10.1155/2015/685603","title":"Canadian Public Health Laboratory Network Laboratory Guidelines for the Use of Direct Tests to Detect Syphilis in Canada","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Syphilis Diagnosis and Treatment","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; University of British Columbia; University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Treponema; Syphilis; Amplicon; Virology; Biology; Infectivity; Parasitology; Pathology; Polymerase chain reaction; Medicine; Microbiology; Virus; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006618605,0.0001533131,0.0005400575,0.0002793302,0.0001116045,0.00001952053,0.0001134682,0.00009783671,0.00006383497],"category_scores_gemma":[0.006799858,0.0001025246,0.00007036992,0.0003959404,0.0001239993,0.00004576257,0.00001270528,0.0001666339,7.144444e-7],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002172021,"about_ca_system_score_gemma":0.08613129,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9868419,"about_ca_topic_score_gemma":0.9998238,"domain_scores_codex":[0.998421,0.0001527849,0.0005886373,0.0001611961,0.0001096775,0.0005667369],"domain_scores_gemma":[0.9934008,0.0005357509,0.0001842549,0.0001656873,0.001143646,0.00456991],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003177095,0.00003176295,0.7113405,0.00003867131,0.0001856796,0.0002545953,0.00008649111,0.0001269162,0.000007695775,0.00002836093,0.2730283,0.01483919],"study_design_scores_gemma":[0.002026972,0.00107919,0.2098103,0.0003803901,0.0001085089,0.0003323012,0.0002022629,0.00002629064,0.000009827259,0.00002318556,0.7858508,0.0001499229],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8798087,0.03700414,0.00002439597,0.07970703,0.001265687,0.0006934939,0.00147992,0.000005427566,0.00001119768],"genre_scores_gemma":[0.9719776,0.0006542663,0.0001002063,0.02683203,0.0003640403,0.00002630943,0.00002320317,0.00001694731,0.000005427607],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5128224,"threshold_uncertainty_score":0.9190495,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05206512941410041,"score_gpt":0.2944812834857461,"score_spread":0.2424161540716457,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}