{"id":"W3185462485","doi":"10.1101/2021.07.23.453609","title":"Golden Gate Assembly of Aerobic and Anaerobic Microbial Bioreporters","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bioreporter; Biosensor; Reporter gene; Escherichia coli; Green fluorescent protein; Computational biology; Biology; Chemistry; Gene; Genetics; Gene expression; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002138447,0.0003564716,0.0002914212,0.0001999725,0.0001999176,0.0005049945,0.0003712833,0.0003867633,0.0004178207],"category_scores_gemma":[0.0002600014,0.0002169456,0.000292013,0.0001269302,0.0002753655,0.0002953832,0.0003946285,0.0003796275,0.0002836986],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004350766,"about_ca_system_score_gemma":0.0002113712,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004338146,"about_ca_topic_score_gemma":0.0005333857,"domain_scores_codex":[0.9997422,0.00003773416,0.00002002491,0.00005734611,0.00008569926,0.00005703435],"domain_scores_gemma":[0.999842,0.00002619006,0.00004759489,0.00001609785,0.00002647559,0.00004158872],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003433647,0.00002669938,0.0001688697,0.00002066794,0.000005289536,0.0001150396,0.00003094685,0.001834404,0.994545,0.001309119,0.00007304792,0.001836412],"study_design_scores_gemma":[0.00001223272,0.00015657,0.0004193959,0.000004814234,0.000006123698,0.00006679866,0.0000234114,0.01906611,0.9768697,0.0002490162,0.00311366,0.00001210887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.9511759,0.0003043957,0.04467594,0.0001230934,0.0001055431,0.00005861477,0.000105339,0.0003374266,0.003113654],"genre_scores_gemma":[0.9747482,0.000176659,0.022094,0.00004818252,0.00001190354,0.00004286636,0.0001749085,0.00004275225,0.00266058],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.0005049945,"threshold_uncertainty_score":0.003156662,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01152573826459502,"score_gpt":0.2330651906269834,"score_spread":0.2215394523623884,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}