{"id":"W3185639601","doi":"10.3389/fonc.2021.687730","title":"The Impact of Foundation Medicine Testing on Cancer Patients: A Single Academic Centre Experience","year":2021,"lang":"en","type":"article","venue":"Frontiers in Oncology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; Internal medicine; KRAS; Precision medicine; Oncology; CDKN2A; Cancer; Retrospective cohort study; Clinical Oncology; Personalized medicine; Bioinformatics; Pathology; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009256945,0.00008134315,0.0001422286,0.00002233548,0.00004953088,0.000004163132,0.000120199,0.0001159742,0.00001244992],"category_scores_gemma":[0.001279898,0.00006079661,0.00003476509,0.0001345975,0.0001459464,0.000002656205,0.00005948676,0.0001022993,5.438948e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002513723,"about_ca_system_score_gemma":0.0002605208,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001636769,"about_ca_topic_score_gemma":0.0002183318,"domain_scores_codex":[0.9992881,0.00005819958,0.0002196994,0.0001890022,0.00006839325,0.0001766445],"domain_scores_gemma":[0.9994144,0.0001094135,0.0001359666,0.0001515065,0.0001512109,0.00003752854],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003285335,0.0002581271,0.6358563,0.000009403871,0.00006205802,0.000006273155,0.0008431387,0.001582465,0.09902497,0.00006253234,0.03632853,0.2256377],"study_design_scores_gemma":[0.01074983,0.01174263,0.3979079,0.0004261682,0.00009344742,0.00001735092,0.007711753,0.002955473,0.2104987,0.003260063,0.3536294,0.001007245],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947744,0.002118232,0.0002942157,0.0004227874,0.001016114,0.0001054685,0.00001212132,0.000002197983,0.001254459],"genre_scores_gemma":[0.9973157,0.00153692,0.0005413782,0.0002211091,0.0002160737,0.00001889715,0.00005101763,0.000009291814,0.00008958606],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3173009,"threshold_uncertainty_score":0.2479214,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02117964768622371,"score_gpt":0.3324430190250365,"score_spread":0.3112633713388128,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}