{"id":"W3186008135","doi":"10.3389/fcimb.2021.685861","title":"Meta-Analysis of Bovine Digital Dermatitis Microbiota Reveals Distinct Microbial Community Structures Associated With Lesions","year":2021,"lang":"en","type":"review","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Dermatology and Skin Diseases","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Canadian Dairy Commission; Alberta Agriculture and Forestry; University of Calgary","keywords":"Biology; Hypervariable region; Mycoplasma; Metagenomics; Fusobacterium; Fusobacteria; Microbiology; Treponema; Microbiome; Genetics; 16S ribosomal RNA; Bacteria; Virology; Bacteroidetes; Gene; Bacteroides","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00835504,0.00143718,0.003238581,0.005607866,0.0006431797,0.00285455,0.0009083392,0.001038401,0.00183636],"category_scores_gemma":[0.01096128,0.0007225089,0.01278052,0.004503253,0.0003462755,0.0009332524,0.001369518,0.0009153564,0.000206643],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007376819,"about_ca_system_score_gemma":0.001045361,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005619674,"about_ca_topic_score_gemma":0.007187129,"domain_scores_codex":[0.9939436,0.00333762,0.0006064008,0.00134396,0.0004647162,0.0003037006],"domain_scores_gemma":[0.9925584,0.00490524,0.0008738607,0.0009794395,0.0004239354,0.0002591754],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.004299567,0.0001188737,0.5437208,0.01091998,0.3729705,0.0005742339,0.000420716,0.008323712,0.01499141,0.0005682274,0.001554649,0.0415374],"study_design_scores_gemma":[0.0002340004,0.001136503,0.6141538,0.003147117,0.3430988,0.001124396,0.001096379,0.02035648,0.00434539,0.002164455,0.009004487,0.0001380605],"study_design_candidate":"meta_analysis","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.7047818,0.2572813,0.02522086,0.001298985,0.0003014024,0.000173828,0.008944832,0.0003746483,0.00162236],"genre_scores_gemma":[0.9834785,0.009053469,0.004599647,0.0002129431,0.00004948707,0.00006967231,0.002212811,0.00006615253,0.0002571682],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.00835504,"threshold_uncertainty_score":0.04418617,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04559014577192726,"score_gpt":0.2898084841588026,"score_spread":0.2442183383868753,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}