{"id":"W3186681948","doi":"10.1128/aac.01069-21","title":"Characterization of Proteobacterial Plasmid Integron-Encoded <i>qac</i> Efflux Pump Sequence Diversity and Quaternary Ammonium Compound Antiseptic Selection in Escherichia coli Grown Planktonically and as Biofilms","year":2021,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada; Manitoba Medical Service Foundation","keywords":"Integron; Efflux; Plasmid; Microbiology; Escherichia coli; Antiseptic; Ammonium; Biology; Multiple drug resistance; Biofilm; Gene; Chemistry; Bacteria; Antibiotics; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001782679,0.0001790763,0.0002222953,0.0005662258,0.0001249819,0.0003730669,0.0001240361,0.0001927868,0.000327979],"category_scores_gemma":[0.0005467985,0.000119605,0.0001541438,0.0005509991,0.0001715442,0.0001481241,0.0001806667,0.0002554537,0.0001544558],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001286466,"about_ca_system_score_gemma":0.0002528394,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002038369,"about_ca_topic_score_gemma":0.001776902,"domain_scores_codex":[0.9998449,0.00001949562,0.00001442711,0.00003425148,0.00005435745,0.00003259545],"domain_scores_gemma":[0.9996318,0.00007279517,0.00008851061,0.00001906946,0.0001089528,0.00007895754],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006588368,0.00002593563,0.007224974,0.00002411981,0.0000073147,0.00004709954,0.0001010002,0.00004203723,0.9905388,0.00002606455,0.00001883224,0.001877875],"study_design_scores_gemma":[0.00001551085,0.0006985959,0.5841216,0.00002906214,0.00007388989,0.001392231,0.0007490686,0.001656024,0.4090727,0.0001024161,0.002063956,0.00002492453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989426,0.0001686329,0.0003194345,0.00002050153,0.00000165149,0.000007978399,0.0002846593,0.000004064232,0.0002505387],"genre_scores_gemma":[0.9961158,0.0003562681,0.001334339,0.00003541517,0.000005419256,0.00001986824,0.00141839,0.000007317638,0.0007071585],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002038369,"threshold_uncertainty_score":0.004052997,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01123716483897998,"score_gpt":0.2337194049000476,"score_spread":0.2224822400610676,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}