{"id":"W3186973394","doi":"10.3390/microorganisms9081560","title":"Transcriptome Analysis of Durusdinium Associated with the Transition from Free-Living to Symbiotic","year":2021,"lang":"en","type":"article","venue":"Microorganisms","topic":"Coral and Marine Ecosystems Studies","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Institute of Genetics; University of Tsukuba; Kurita Water and Environment Foundation","keywords":"Biology; Endosymbiosis; Transcriptome; Dinoflagellate; Symbiodinium; Gene; Phylogenetic tree; Symbiosis; Heat shock protein; Gene expression; Evolutionary biology; Genetics; Computational biology; Botany; Plastid; Bacteria; Chloroplast","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000138267,0.0003384799,0.0005197087,0.0005109836,0.0003020767,0.0005948248,0.0001200885,0.0002434043,0.0004362334],"category_scores_gemma":[0.0002571206,0.0001461553,0.0003478038,0.0007761106,0.0002010113,0.0003253942,0.0005305174,0.000264752,0.0001265833],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000340015,"about_ca_system_score_gemma":0.0002641623,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001379014,"about_ca_topic_score_gemma":0.001488568,"domain_scores_codex":[0.9998635,0.00001270391,0.00001006435,0.00005133757,0.00002923997,0.00003316974],"domain_scores_gemma":[0.9998348,0.00002506239,0.00004467845,0.00001384234,0.00003690849,0.00004463561],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002468682,0.00001456059,0.007870575,0.00006972654,0.00001195414,0.00008562722,0.0002160694,0.00006074625,0.989202,0.00004070512,0.00002033945,0.002160898],"study_design_scores_gemma":[0.00002121751,0.0004722327,0.8152236,0.00003058978,0.00009495763,0.0005906333,0.00153501,0.002123948,0.1756932,0.0002342263,0.003947714,0.00003262183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981487,0.0004228172,0.0004054962,0.00001523809,0.000005617576,0.000006270123,0.0005405486,0.00001132848,0.0004441018],"genre_scores_gemma":[0.9960538,0.0003220542,0.001029285,0.00004068195,0.000004728845,0.00002739902,0.001660787,0.00001017331,0.0008510786],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001379014,"threshold_uncertainty_score":0.002741992,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005171029412493303,"score_gpt":0.1716623351261738,"score_spread":0.1664913057136805,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}