{"id":"W3188003502","doi":"10.3390/antibiotics10080972","title":"Whole-Genome Sequencing for Molecular Characterization of Carbapenem-Resistant Enterobacteriaceae Causing Lower Urinary Tract Infection among Pediatric Patients","year":2021,"lang":"en","type":"article","venue":"Antibiotics","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Qatar University","keywords":"Microbiology; Antibiotic resistance; Biology; Carbapenem-resistant enterobacteriaceae; Multilocus sequence typing; Enterobacteriaceae; Klebsiella pneumoniae; Population; Carbapenem; Antimicrobial; Pseudomonas aeruginosa; Whole genome sequencing; Antibiotics; Escherichia coli; Bacteria; Genotype; Genetics; Gene; Genome; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004443105,0.0004524637,0.0007049402,0.001732135,0.0003272494,0.0006760113,0.0003086139,0.0004487988,0.002085268],"category_scores_gemma":[0.001132272,0.0002378724,0.0008489507,0.002101083,0.0001542119,0.0002055634,0.0004660964,0.0005641483,0.0008992635],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003457185,"about_ca_system_score_gemma":0.0007418222,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003831005,"about_ca_topic_score_gemma":0.005726132,"domain_scores_codex":[0.9994685,0.00006889773,0.00006701211,0.0001484668,0.0001578025,0.0000894758],"domain_scores_gemma":[0.9995048,0.00008080753,0.0001208142,0.00004371012,0.0001934138,0.00005646388],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001538019,0.0004078543,0.2599589,0.001505206,0.0005485344,0.003616035,0.001630688,0.00166777,0.6078111,0.0007324817,0.01306691,0.1075165],"study_design_scores_gemma":[0.0001273532,0.0007971427,0.8547047,0.0004403477,0.0005420257,0.005477987,0.001267086,0.004280817,0.05869395,0.0003347137,0.07328732,0.00004645575],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.876209,0.005688269,0.01505807,0.0007650016,0.0001035269,0.0007356114,0.09581523,0.0003596727,0.005265698],"genre_scores_gemma":[0.8440638,0.004099906,0.03644247,0.001127063,0.00008260243,0.0004582117,0.1092501,0.0003565627,0.004119275],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003831005,"threshold_uncertainty_score":0.007617414,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00869845664408616,"score_gpt":0.2286088811607898,"score_spread":0.2199104245167036,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}