{"id":"W3188017990","doi":"10.1099/jmm.0.001404","title":"Validation of saliva sampling as an alternative to oro-nasopharyngeal swab for detection of SARS-CoV-2 using unextracted rRT-PCR with the Allplex 2019-nCoV assay","year":2021,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Intégré de Santé et de Services Sociaux des Laurentides; Université de Sherbrooke; Université de Montréal; Institut National de la Recherche Scientifique","funders":"","keywords":"Saliva; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Medicine; Real-time polymerase chain reaction; Gastroenterology; Virology; Biology; Internal medicine; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008753262,0.00124994,0.0006306033,0.0008296603,0.0003744338,0.0009904588,0.00065102,0.000736392,0.001065003],"category_scores_gemma":[0.009237885,0.0005108314,0.0006810342,0.0005154767,0.0007793712,0.0003500783,0.0005227547,0.0003606629,0.0008401577],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002856418,"about_ca_system_score_gemma":0.0006851691,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001062939,"about_ca_topic_score_gemma":0.001240766,"domain_scores_codex":[0.9845988,0.007873945,0.001313424,0.002150708,0.003645114,0.0004180075],"domain_scores_gemma":[0.9961909,0.001507142,0.0005322912,0.0004755553,0.001154026,0.0001401052],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003592273,0.0007776913,0.4840851,0.001095856,0.0005172257,0.0003572358,0.001770306,0.001110552,0.4564725,0.0002875047,0.000824174,0.0491096],"study_design_scores_gemma":[0.0003250497,0.01228942,0.5376685,0.0006098229,0.0008809121,0.005315525,0.001212895,0.0156588,0.4155115,0.0002681945,0.01011118,0.0001482227],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9700132,0.002358065,0.02289933,0.0001311009,0.0001985638,0.0009881604,0.001264312,0.0001648494,0.001982403],"genre_scores_gemma":[0.9572079,0.0007470124,0.03757768,0.0002542995,0.00006639217,0.0009671079,0.002491901,0.00004975494,0.0006378072],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008753262,"threshold_uncertainty_score":0.04629219,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08351385683878247,"score_gpt":0.379925727187639,"score_spread":0.2964118703488565,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}