{"id":"W3191302097","doi":"10.3791/62459","title":"Investigating the Phagocytosis of &lt;em&gt;Leishmania&lt;/em&gt; using Confocal Microscopy","year":2021,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação Oswaldo Cruz; University of Toronto","keywords":"Internalization; Phagosome; Cell biology; Phagocytosis; Leishmania; Biology; Amastigote; Rab; Vacuole; Macrophage; Receptor; Cytoplasm; Biochemistry; In vitro; GTPase; Parasite hosting","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001384736,0.0003670263,0.001247811,0.0002736811,0.0003258344,0.0001463476,0.0004087001,0.0001496406,0.0003686374],"category_scores_gemma":[0.001789714,0.0002624003,0.0004915236,0.0006198132,0.000411915,0.0003234954,0.0003654076,0.0005837674,0.00001489098],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003742519,"about_ca_system_score_gemma":0.0008164859,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002709866,"about_ca_topic_score_gemma":0.000008224536,"domain_scores_codex":[0.9950153,0.0005384091,0.001586996,0.0003399663,0.001900281,0.0006190306],"domain_scores_gemma":[0.9960529,0.0003445922,0.001152987,0.0004989635,0.001551952,0.0003986606],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003787722,0.0005943161,0.004279094,0.0001406769,0.001051734,0.0002590807,0.006284307,0.00001009493,0.9827697,0.0001445267,0.003424221,0.0006635003],"study_design_scores_gemma":[0.00628319,0.0007230504,0.003871731,0.001119034,0.0003068111,0.0007153316,0.008241441,0.0004475967,0.9742261,0.00007301076,0.003762912,0.0002298162],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9864362,0.0108214,0.0004296702,0.0006363085,0.0005002301,0.0003698342,0.000009629669,0.00001961781,0.0007770424],"genre_scores_gemma":[0.9811587,0.0007434099,0.01614105,0.0009311191,0.0005326216,0.00001316342,0.000005862093,0.00007939307,0.0003946671],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01571138,"threshold_uncertainty_score":0.9999828,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07330946480181771,"score_gpt":0.4480821415687106,"score_spread":0.3747726767668929,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}