{"id":"W3191401219","doi":"10.1128/jcm.00973-21","title":"Identification of Staphylococcus pseudintermedius Isolates from Wound Cultures by Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry Improves Accuracy of Susceptibility Reporting at an Increase in Cost","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Staphylococcus pseudintermedius; Microbiology; Staphylococcus aureus; Coagulase; Staphylococcus; Antibiotics; Staphylococcal infections; Medicine; Biology; Micrococcaceae; Bacteria; Antibacterial agent; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.002428227,0.0001447735,0.000718438,0.00009192176,0.00003349379,0.0000196722,0.0002453898,0.0003694173,0.0001287917],"category_scores_gemma":[0.01149065,0.0001298816,0.0002831725,0.0002239647,0.0002595462,0.00003095522,0.0001054874,0.0002159084,0.000001677924],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000455955,"about_ca_system_score_gemma":0.0002121596,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005382391,"about_ca_topic_score_gemma":0.000178234,"domain_scores_codex":[0.9940509,0.0007896984,0.004542576,0.000387661,0.00007489366,0.0001542497],"domain_scores_gemma":[0.9910846,0.0004181604,0.006867215,0.0004375988,0.001104665,0.0000877717],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005782071,0.0005514218,0.119374,0.00005021308,0.00009593128,0.000002488348,0.00005193158,0.000009655031,0.8785011,0.000001324616,0.0002366717,0.0005470699],"study_design_scores_gemma":[0.0008821485,0.0003002081,0.1703946,0.00005233378,0.00005660026,0.00002827119,0.0001402738,0.00004795552,0.8277978,0.00008297083,0.0001203078,0.00009653901],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982017,0.0003500053,0.0006694705,0.00009348727,0.0002900458,0.0001702502,0.000215551,0.000003522143,0.000005979862],"genre_scores_gemma":[0.9968888,0.000161119,0.001874574,0.00003164216,0.0001469504,0.000001666267,0.0007953699,0.00001195482,0.00008796147],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05102061,"threshold_uncertainty_score":0.996836,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02302929989017539,"score_gpt":0.3516336188311518,"score_spread":0.3286043189409764,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}