{"id":"W3193676703","doi":"10.1093/g3journal/jkab255","title":"Improved draft reference genome for the Glassy-winged Sharpshooter ( <i>Homalodisca vitripennis</i> ), a vector for Pierce’s disease","year":2021,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Phytoplasmas and Hemiptera pathogens","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Food and Agriculture; University of California, Riverside; Canadian Institute for Advanced Research; California Department of Food and Agriculture; National Institutes of Health; University of California; U.S. Department of Agriculture","keywords":"Biology; Genome; Sequence assembly; Reference genome; Xylella fastidiosa; Nasonia vitripennis; Genetics; Whole genome sequencing; Gene; Genome project; Host (biology)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002110508,0.0003551451,0.0003484715,0.0000138596,0.0007137777,0.0002565218,0.0006193708,0.000144589,0.0002257729],"category_scores_gemma":[0.00002272114,0.0001501284,0.0003864912,0.0002415133,0.00008521022,0.00006307538,0.0002338066,0.0001156337,0.00001887593],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004904159,"about_ca_system_score_gemma":0.0001009812,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004475474,"about_ca_topic_score_gemma":0.000470238,"domain_scores_codex":[0.9978389,0.00005343803,0.000405944,0.0007455291,0.0002161903,0.0007400363],"domain_scores_gemma":[0.9985014,0.0003996767,0.0001506062,0.0003221681,0.0003197873,0.0003063841],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001549197,0.00008791587,0.001759033,0.00004644701,0.00006594071,0.000004935676,0.00009617709,0.0000399774,0.7214562,0.00009080486,0.0003124587,0.2758852],"study_design_scores_gemma":[0.0005710422,0.0003165115,0.02869078,0.00001185725,0.0002019803,0.000009132482,0.0001879958,0.00203918,0.02542211,0.0005496643,0.9414458,0.0005539499],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6313252,0.3519218,0.001296962,0.005294851,0.0009701402,0.002754038,0.006034164,0.0001454125,0.0002573957],"genre_scores_gemma":[0.963551,0.02378745,0.003595991,0.001841346,0.002186887,0.0009463025,0.001372233,0.00001648276,0.002702324],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9411333,"threshold_uncertainty_score":0.6122059,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0323117549233712,"score_gpt":0.2350033218499901,"score_spread":0.2026915669266189,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}