{"id":"W3193739886","doi":"10.21608/avmj.2019.168906","title":"MOLECULAR DETECTION OF SALMONELLA AND E. COLI MICROORGANISMS AMONG DAIRY FARMS WITH DETECTION OF VIRULENCE AND ANTIBIOTICS RESISTANCE GENES","year":2019,"lang":"en","type":"article","venue":"Assiut Veterinary Medical Journal/Maǧallaẗ Asyūṭ al-ṭibiyyaẗ al-baytariyyaẗ","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Assiut University; Public Health Agency; Public Health Agency of Canada","keywords":"Virulence; Salmonella; Biology; Antibiotics; Gene; Microbiology; Antibiotic resistance; Microorganism; Biotechnology; Dairy cattle; Genetics; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00109492,0.0004877508,0.0006300184,0.0002767617,0.000289392,0.0001135308,0.0004837409,0.0005373887,0.00006055456],"category_scores_gemma":[0.0002271041,0.0004508434,0.0001711509,0.0003855418,0.0009008702,0.00004733102,0.0002467633,0.0005961281,0.00001032392],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005680015,"about_ca_system_score_gemma":0.0002430214,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005371034,"about_ca_topic_score_gemma":0.00008971671,"domain_scores_codex":[0.9960847,0.0003777723,0.001168889,0.000908834,0.0009506324,0.0005091896],"domain_scores_gemma":[0.9970134,0.00009100881,0.001042081,0.0008271997,0.0005758852,0.0004503738],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007177033,0.0001742784,0.004678546,0.0002471604,0.0002413286,0.00005989643,0.000142941,0.0000433953,0.9891152,0.0000438476,0.0001343578,0.004401298],"study_design_scores_gemma":[0.00197986,0.002001939,0.03462696,0.000416259,0.0001425356,0.001308943,0.0004312106,0.0006579422,0.9480603,0.00005445074,0.009698754,0.0006208105],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9864135,0.002657561,0.008948136,0.0004930639,0.0006875929,0.0005035941,0.00002883811,0.00003467379,0.0002329912],"genre_scores_gemma":[0.9953144,0.002645789,0.001070335,0.0003305595,0.0001199643,0.000006844628,0.00003600095,0.00009034079,0.0003857471],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04105491,"threshold_uncertainty_score":0.9997943,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009419791136513972,"score_gpt":0.2481304908620233,"score_spread":0.2387106997255093,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}