{"id":"W3193761890","doi":"10.1371/journal.pgen.1009669","title":"Genomic islands targeting dusA in Vibrio species are distantly related to Salmonella Genomic Island 1 and mobilizable by IncC conjugative plasmids","year":2021,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; Canadian Institutes of Health Research","keywords":"Genomic island; Biology; Plasmid; Genetics; Vibrio cholerae; Gene; Genome; Salmonella; Extrachromosomal DNA; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006420477,0.0001937858,0.0001690662,0.0004103809,0.0001404991,0.0002156476,0.000130976,0.0001787776,0.0003723893],"category_scores_gemma":[0.000149898,0.0001749954,0.0002072761,0.0002403847,0.0001792273,0.00007605387,0.000254598,0.0002699907,0.0001595374],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003149234,"about_ca_system_score_gemma":0.0002024996,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001535985,"about_ca_topic_score_gemma":0.002272044,"domain_scores_codex":[0.9999229,0.000004513368,0.000005214739,0.0000301488,0.00001755961,0.00001965145],"domain_scores_gemma":[0.9998612,0.00001890248,0.0000502719,0.00001256951,0.00001752351,0.00003938848],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006312162,0.000007811824,0.003351351,0.00002936232,0.000003086578,0.00004344372,0.00004862311,0.00004100096,0.9953117,0.00004061544,0.00000814178,0.001051845],"study_design_scores_gemma":[0.00002431974,0.000617671,0.5702496,0.00004974876,0.00005824057,0.001823087,0.0004222149,0.001455463,0.4207169,0.0002350737,0.004320325,0.00002742199],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984965,0.0003527311,0.0005347546,0.00001327567,0.000003243509,0.000008380351,0.0002224489,0.00001534924,0.0003534434],"genre_scores_gemma":[0.9964002,0.000182733,0.001201784,0.00002100313,0.000002785312,0.00001224586,0.001532037,0.000007835208,0.0006394182],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001535985,"threshold_uncertainty_score":0.003054142,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007388424187835144,"score_gpt":0.214894628522346,"score_spread":0.2075062043345109,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}