{"id":"W3194282289","doi":"10.1093/g3journal/jkab294","title":"Global analysis of <i>Saccharomyces cerevisiae</i> growth in mucin","year":2021,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Mucin; Saccharomyces cerevisiae; Biology; Transcriptome; Candida albicans; Yeast; Microbiology; Corpus albicans; Metagenomics; Gene; Biochemistry; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001534196,0.0002104847,0.0004336774,0.0001018619,0.00004285434,0.00002070081,0.0002722632,0.0001921618,0.00007765749],"category_scores_gemma":[0.000006060139,0.0002265156,0.0002440682,0.001168921,0.00006731523,0.000002197141,0.0002180831,0.00005500278,0.000006660313],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003231746,"about_ca_system_score_gemma":0.0003403636,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005779626,"about_ca_topic_score_gemma":0.001184579,"domain_scores_codex":[0.9983646,0.0001049683,0.0004801558,0.0005231792,0.0001437856,0.0003833533],"domain_scores_gemma":[0.998981,0.000009451443,0.0001466211,0.0005334929,0.0002173409,0.0001120669],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002259598,0.0001521088,0.4995969,0.00009287296,0.0005819846,0.00001295808,0.00007355944,0.001224299,0.4317073,0.0001223406,0.0003097017,0.06610347],"study_design_scores_gemma":[0.001467115,0.0003465458,0.4853842,0.00003184539,0.00127662,0.00005175059,0.0004994292,0.0003051258,0.3811332,0.000247882,0.1283653,0.0008910013],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6192484,0.3794487,0.0002666474,0.0001136353,0.00009762312,0.00009615435,0.000156484,0.000005442983,0.0005669211],"genre_scores_gemma":[0.8558213,0.1399032,0.003232206,0.0003457259,0.000101901,0.000006536989,0.0004011286,0.00001740114,0.000170588],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2395456,"threshold_uncertainty_score":0.9237039,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009735557394653259,"score_gpt":0.2659815858744601,"score_spread":0.2562460284798068,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}