{"id":"W3194928289","doi":"10.1038/s41541-021-00358-9","title":"Haplotype-resolved de novo assembly of the Vero cell line genome","year":2021,"lang":"en","type":"article","venue":"npj Vaccines","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill Genome Centre; McGill University","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Canada; McGill University","keywords":"Vero cell; Biology; Genome; Virology; Gene; Virus; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005953722,0.00105877,0.000904,0.0010699,0.000621884,0.001449027,0.0006837955,0.0007176785,0.003088212],"category_scores_gemma":[0.002344669,0.0006240368,0.001294318,0.001451617,0.0003217125,0.0005052979,0.0006200753,0.001648409,0.002591642],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005721012,"about_ca_system_score_gemma":0.001145583,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004432182,"about_ca_topic_score_gemma":0.005810088,"domain_scores_codex":[0.9996831,0.00006080071,0.00003095539,0.0001020229,0.00007878559,0.00004428956],"domain_scores_gemma":[0.9992182,0.0002731448,0.0001038279,0.0001417805,0.0002028172,0.00006010653],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001009366,0.0001858083,0.006599098,0.001166902,0.0001668637,0.003048008,0.001162114,0.02972046,0.8755764,0.00421439,0.009379298,0.06777119],"study_design_scores_gemma":[0.0002060602,0.0008117579,0.0211794,0.0004357456,0.000534616,0.002069574,0.0007847659,0.217113,0.53579,0.007667411,0.2130687,0.0003389476],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.3156036,0.003605057,0.5975909,0.0006318366,0.0009594258,0.0008319977,0.05571292,0.01207934,0.01298499],"genre_scores_gemma":[0.2478943,0.002018959,0.5976369,0.0002409888,0.00008830361,0.0007502922,0.1411889,0.004679382,0.005501878],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.004432182,"threshold_uncertainty_score":0.01033109,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01641256420677518,"score_gpt":0.2817029492657251,"score_spread":0.26529038505895,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}