{"id":"W3194990160","doi":"10.1128/msphere.00650-21","title":"RNase III and RNase E Influence Posttranscriptional Regulatory Networks Involved in Virulence Factor Production, Metabolism, and Regulatory RNA Processing in Bordetella pertussis","year":2021,"lang":"en","type":"article","venue":"mSphere","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Simon Fraser University; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biology; RNase P; Transcriptome; Bordetella pertussis; Virulence; Gene; RNA; Genetics; Regulon; Gene expression; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001991436,0.0002613213,0.0002826872,0.000191056,0.0002718986,0.0005058108,0.00008803858,0.000278158,0.0004865537],"category_scores_gemma":[0.000207351,0.0001602473,0.0003275331,0.0001316278,0.0002788106,0.000189552,0.0002126954,0.000464961,0.0001867379],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003134515,"about_ca_system_score_gemma":0.0003047164,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001251661,"about_ca_topic_score_gemma":0.002453448,"domain_scores_codex":[0.9998036,0.00002924588,0.00001298406,0.00005271016,0.00005430738,0.00004715392],"domain_scores_gemma":[0.9998802,0.00003975799,0.0000311948,0.00001001726,0.00001528934,0.00002353827],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009490538,0.00000680048,0.001001203,0.00002621383,0.000005665284,0.00002155643,0.00001788787,0.0001154736,0.9975638,0.00005663725,0.0000267462,0.001062937],"study_design_scores_gemma":[0.00001742342,0.0002419022,0.1019699,0.00002577069,0.00007934684,0.0002228744,0.0003495822,0.006726312,0.8861232,0.000481853,0.003740935,0.00002087033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937786,0.001495954,0.003037899,0.0001476047,0.00002096853,0.000008202966,0.0005651031,0.00007665831,0.0008689405],"genre_scores_gemma":[0.995167,0.0005875151,0.002322626,0.000132313,0.000008124078,0.00001663024,0.0006711191,0.0000401205,0.001054691],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001251661,"threshold_uncertainty_score":0.002488732,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01056673210483099,"score_gpt":0.2241794983451713,"score_spread":0.2136127662403403,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}