{"id":"W3195306693","doi":"10.1007/s13258-021-01146-4","title":"A comprehensive analysis of gorilla-specific LINE-1 retrotransposons","year":2021,"lang":"en","type":"article","venue":"Genes & Genomics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"Brock University","funders":"Ministry of Education","keywords":"Gorilla; Biology; Retrotransposon; Genome; ORFS; Genetics; Evolutionary biology; Subfamily; Gene; Transposable element; Open reading frame; Peptide sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001739925,0.0005167006,0.0004632494,0.001089491,0.0003790966,0.0003789129,0.0002613547,0.0002829174,0.001147257],"category_scores_gemma":[0.0002093473,0.0001758297,0.000469167,0.0009083581,0.000198468,0.0002090511,0.0003998364,0.0005331755,0.0004414544],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002074712,"about_ca_system_score_gemma":0.0004876551,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001236136,"about_ca_topic_score_gemma":0.004393421,"domain_scores_codex":[0.9998696,0.00001453977,0.000009475872,0.00004178675,0.0000366903,0.00002798114],"domain_scores_gemma":[0.9998617,0.00002868087,0.00002761674,0.0000210609,0.00002196968,0.00003889447],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001477399,0.00001849784,0.003181104,0.0001381172,0.00004605308,0.0002053893,0.00008077513,0.000165912,0.9842759,0.0001748761,0.0000966794,0.01146892],"study_design_scores_gemma":[0.00005314141,0.0007813028,0.412913,0.0001191042,0.0008453301,0.007910854,0.000503957,0.002972522,0.5136648,0.0007954246,0.05934882,0.00009184473],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9810181,0.002291132,0.00826248,0.00005849228,0.00001764028,0.00008947232,0.006044645,0.0001946129,0.002023434],"genre_scores_gemma":[0.943028,0.002323288,0.0255714,0.0001540706,0.00001698241,0.00006925654,0.02608343,0.0001748351,0.002578885],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001236136,"threshold_uncertainty_score":0.003838003,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03505538003835027,"score_gpt":0.2277739331737262,"score_spread":0.192718553135376,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}