{"id":"W3195502898","doi":"10.2196/32293","title":"Authors’ Response to Peer Reviews of “Emergence of the First Strains of SARS-CoV-2 Lineage B.1.1.7 in Romania: Genomic Analysis”","year":2021,"lang":"en","type":"article","venue":"JMIRx Med","topic":"COVID-19 diagnosis using AI","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Lineage (genetic); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Biology; Coronavirus disease 2019 (COVID-19); Genetics; Evolutionary biology; Virology; Computational biology; Medicine; Gene; Infectious disease (medical specialty)","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002117297,0.00016271,0.0009792318,0.0003727483,0.00002920361,0.000004092678,0.0002912248,0.0001071333,0.0002627412],"category_scores_gemma":[0.005636343,0.0001261583,0.0004321207,0.00295733,0.00008934625,0.00002912313,0.0001683387,0.0002012597,0.00001091824],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009954266,"about_ca_system_score_gemma":0.0003616371,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003125917,"about_ca_topic_score_gemma":0.002978135,"domain_scores_codex":[0.9974992,0.000391614,0.001044334,0.0003459301,0.0005087815,0.0002101862],"domain_scores_gemma":[0.9976923,0.000354771,0.0003816601,0.001104504,0.0004029559,0.00006380198],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003995047,0.0004989283,0.02380322,0.0005046244,0.0002357897,0.00003645125,0.004229708,0.0001715133,0.9321872,0.00004185033,0.03760562,0.0002856123],"study_design_scores_gemma":[0.0007443487,0.0001360662,0.4629559,0.0005511212,0.0006184333,0.000002992877,0.0001665575,0.0002399573,0.2857198,0.000006534711,0.2487402,0.0001181088],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9295393,0.0005064935,0.00006075749,0.06895045,0.0001261568,0.0006586882,0.00004113884,0.000009723103,0.0001072738],"genre_scores_gemma":[0.9935205,0.0001130292,0.0009253383,0.003095652,0.00003556872,0.00004505042,0.00001008339,0.00002131056,0.002233478],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6464674,"threshold_uncertainty_score":0.6747636,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08150444651079303,"score_gpt":0.3924798533826213,"score_spread":0.3109754068718283,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}