{"id":"W3195817928","doi":"10.1097/inf.0000000000002766","title":"The Etiology of Childhood Pneumonia in The Gambia","year":2021,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Centers for Disease Control and Prevention; Johns Hopkins University; Bill and Melinda Gates Foundation; International Centre for Diarrhoeal Disease Research, Bangladesh; National Research Foundation; University of Oxford; Medical Research Council; London School of Hygiene and Tropical Medicine; Johns Hopkins Bloomberg School of Public Health; Wellcome Trust; University of Otago; Pfizer; GlaxoSmithKline; Sanofi","keywords":"Medicine; Etiology; Streptococcus pneumoniae; Pneumonia; Sputum; Haemophilus influenzae; Bacterial pneumonia; Epidemiology; Pneumococcal conjugate vaccine; Incidence (geometry); Pediatrics; Internal medicine; Immunology; Tuberculosis; Pathology; Antibiotics; Microbiology; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009009021,0.0001398463,0.0002098661,0.0001203887,0.0008069785,0.00006287206,0.0002057598,0.00006726851,0.00008984867],"category_scores_gemma":[0.0008808558,0.00006229964,0.000287394,0.0007177431,0.0001495604,0.00005008348,0.00005089498,0.0009111808,0.00002986733],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005896418,"about_ca_system_score_gemma":0.0008358098,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001168066,"about_ca_topic_score_gemma":0.00005647711,"domain_scores_codex":[0.9981242,0.0006504793,0.000440616,0.0001327006,0.0003296459,0.0003223769],"domain_scores_gemma":[0.9983162,0.0006594835,0.0002264745,0.0004277915,0.00021468,0.0001554273],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004656035,0.0006876483,0.9936746,0.00002707747,0.00009399567,0.000310135,0.0006507107,0.0001810045,0.0005212729,0.0004396754,0.002275938,0.001091427],"study_design_scores_gemma":[0.0009227105,0.0001681279,0.9855499,0.0000138226,0.0005050069,0.005045555,0.0003235618,0.00002205631,0.00001096609,0.002572036,0.004786199,0.00008004316],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.98599,0.001750151,0.00002616211,0.009185302,0.0007020331,0.0002368707,0.000007255134,0.00002038508,0.002081835],"genre_scores_gemma":[0.9936417,0.00319137,0.000001903729,0.001516989,0.001490046,0.00002484294,0.000001686932,0.00001425896,0.0001172135],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008124639,"threshold_uncertainty_score":0.6206708,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007404760285106087,"score_gpt":0.255969790528537,"score_spread":0.2485650302434309,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}