{"id":"W3196432935","doi":"10.1093/bioinformatics/btab844","title":"RNAglib: a python package for RNA 2.5 D graphs","year":2021,"lang":"en","type":"preprint","venue":"Bioinformatics","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Agence Nationale de la Recherche","keywords":"Python (programming language); Computer science; Theoretical computer science; Graph; Representation (politics); Artificial intelligence; Programming language","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001094567,0.002624988,0.001939679,0.001725878,0.00108867,0.002502276,0.004625918,0.001184281,0.1151877],"category_scores_gemma":[0.004005766,0.001729757,0.002522342,0.001851822,0.0007077074,0.002130019,0.002825713,0.003714234,0.06345397],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009566557,"about_ca_system_score_gemma":0.001800758,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00568678,"about_ca_topic_score_gemma":0.008391227,"domain_scores_codex":[0.9992065,0.0001314226,0.00005897392,0.0001881569,0.0003027517,0.0001122551],"domain_scores_gemma":[0.9991125,0.0004028864,0.00006851877,0.0001712581,0.0001622397,0.00008257079],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003438311,0.00009298819,0.001452647,0.00199075,0.0002532284,0.00029664,0.0002583771,0.01911683,0.008453585,0.02555112,0.8675409,0.0746492],"study_design_scores_gemma":[0.0004188143,0.00007954702,0.002057283,0.0002788814,0.0001119652,0.0004307545,0.0001286992,0.2171628,0.0197771,0.09425706,0.6650608,0.0002364494],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.002051077,0.0003496523,0.3183886,0.0004238634,0.0002835851,0.0001891647,0.1059654,0.5618648,0.0104839],"genre_scores_gemma":[0.03933888,0.0008664849,0.3979919,0.001360447,0.0001647688,0.002374961,0.2489691,0.2915802,0.01735326],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.1151877,"threshold_uncertainty_score":0.3853413,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01847481004713547,"score_gpt":0.2524811448278295,"score_spread":0.234006334780694,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}