{"id":"W3197049013","doi":"10.1128/mra.00577-21","title":"Genome Sequence of Staphylococcus aureus Strain PS/BAC/317/16/W, Isolated from Contaminated Platelet Concentrates in England","year":2021,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Blood Services; Health Canada; University of Ottawa","funders":"Health Canada; Government of Canada; Canadian Blood Services","keywords":"Staphylococcus aureus; Whole genome sequencing; Plasmid; Microbiology; Genome; Biology; Strain (injury); Staphylococcus; Chromosome; Genetics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001330104,0.0004589595,0.0005785297,0.001283519,0.0003744103,0.0004155883,0.0002400711,0.0005534917,0.002592745],"category_scores_gemma":[0.0008081506,0.0002461878,0.000457614,0.002194517,0.0001742974,0.0002810372,0.0003168245,0.0006670557,0.002115532],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004779365,"about_ca_system_score_gemma":0.001154764,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02335768,"about_ca_topic_score_gemma":0.01726005,"domain_scores_codex":[0.9998032,0.00001904836,0.0000289917,0.00005297219,0.00006411439,0.0000316679],"domain_scores_gemma":[0.9996263,0.00007887312,0.0001118649,0.00002739359,0.0001119994,0.00004354999],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001696492,0.0001281226,0.01646161,0.001728206,0.00007432272,0.001852829,0.001444779,0.0006819999,0.9307183,0.0004219956,0.01196433,0.03282697],"study_design_scores_gemma":[0.0002631722,0.001250348,0.6021546,0.0007717919,0.0005546791,0.005190377,0.002907711,0.001796147,0.1008215,0.000678567,0.283431,0.000180208],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6587195,0.00394067,0.004334514,0.001173082,0.0002869955,0.0001858323,0.3235132,0.0002921633,0.007554006],"genre_scores_gemma":[0.3372543,0.005681521,0.01453451,0.0003344624,0.0001062096,0.0001445458,0.6331442,0.0001762991,0.008623908],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02335768,"threshold_uncertainty_score":0.04644346,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01790009945356973,"score_gpt":0.2610198954067004,"score_spread":0.2431197959531307,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}