{"id":"W3197299928","doi":"10.1101/2021.09.03.458874","title":"Wildlife in Cameroon harbor diverse coronaviruses including many isolates closely related to human coronavirus 229E","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"","keywords":"Biology; Coronavirus; Zoology; Wildlife; Phylogenetic tree; Amplicon; Genetic diversity; Coronavirus disease 2019 (COVID-19); Virology; Gene; Veterinary medicine; Genetics; Ecology; Polymerase chain reaction; Demography; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003627056,0.000306126,0.0001511294,0.001035866,0.000669273,0.0004996191,0.0001172323,0.0002164472,0.001911822],"category_scores_gemma":[0.0004750675,0.0001598295,0.0001351757,0.0007812086,0.0005044309,0.0004330655,0.0003221701,0.000159351,0.0001164492],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003764333,"about_ca_system_score_gemma":0.0002565088,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01916253,"about_ca_topic_score_gemma":0.02836294,"domain_scores_codex":[0.9998617,0.00003877244,0.000008736242,0.00003820859,0.00001206198,0.00004056212],"domain_scores_gemma":[0.9997312,0.00006703752,0.0001011654,0.00001375622,0.00004243912,0.0000443782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001417162,0.00002346296,0.9738092,0.000062699,0.000039226,0.001521054,0.0008663451,0.000141968,0.01520563,0.00007249015,0.000216246,0.00789988],"study_design_scores_gemma":[0.000006532249,0.0000899824,0.9936494,0.00003375946,0.00002355757,0.001917816,0.002139657,0.000202733,0.0009439964,0.00003787127,0.0009492121,0.00000565627],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989888,0.0004336716,0.0001546408,0.00003363823,0.000006380513,0.000008270457,0.0001592792,0.000003893851,0.0002113939],"genre_scores_gemma":[0.9993787,0.0001684424,0.00020864,0.00002152606,0.000004614526,0.000005634452,0.0001254348,9.147376e-7,0.00008595763],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01916253,"threshold_uncertainty_score":0.03810197,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06414383602421991,"score_gpt":0.3358748185724487,"score_spread":0.2717309825482287,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}