{"id":"W3197876170","doi":"10.7554/elife.66877","title":"Vision, challenges and opportunities for a Plant Cell Atlas","year":2021,"lang":"en","type":"article","venue":"eLife","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":64,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University of Manitoba; University of Saskatchewan; University of Alberta","funders":"Pacific Northwest National Laboratory; Lawrence Berkeley National Laboratory; University of Massachusetts Amherst; Institute of Materials Research and Engineering; University of California, Los Angeles; Punjab Agricultural University; University of Delhi; University of New South Wales; La Trobe University; Helsingin Yliopisto; University of Alberta; University of Oxford; Weizmann Institute of Science; Pennsylvania State University; Bahauddin Zakariya University; Indian Council of Agricultural Research; Rheinische Friedrich-Wilhelms-Universität Bonn; Michigan State University; National Science Foundation; University of Nebraska-Lincoln; Université Catholique de Louvain; University of California, Davis; University of Wisconsin-Madison; University of Missouri; Nanyang Technological University; College of Engineering, Michigan State University; Princeton University; Washington State University; Division of Materials Research; Arkansas State University; Helsinki Institute of Life Science, Helsingin Yliopisto; Iowa State University; North Carolina State University; Biotechnology and Biological Sciences Research Council; Purdue University; Carnegie Institution of Washington; Universidad Veracruzana; Bayer","keywords":"Atlas (anatomy); Component (thermodynamics); Conceptual framework; Plant metabolism; Molecular cell biology; Plant development","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.03332816,0.001093938,0.001474512,0.003832598,0.004047066,0.01211126,0.005109054,0.005340697,0.01595248],"category_scores_gemma":[0.0184459,0.001100941,0.001480816,0.003516304,0.006233211,0.02208991,0.01214079,0.01433678,0.009719113],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005893705,"about_ca_system_score_gemma":0.01874922,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007200425,"about_ca_topic_score_gemma":0.008415512,"domain_scores_codex":[0.995708,0.001216958,0.0003878241,0.0007276491,0.001337668,0.0006218167],"domain_scores_gemma":[0.9578697,0.01272222,0.001037778,0.005797477,0.01010504,0.01246782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002997062,0.0001171695,0.00197941,0.001677598,0.00005965263,0.0003581029,0.001692713,0.001950783,0.0228619,0.4947925,0.2961124,0.1780981],"study_design_scores_gemma":[0.00001069995,0.00003802746,0.0006201459,0.000167026,0.00001560873,0.0001720615,0.0006536752,0.0008938997,0.00196519,0.0776134,0.9178145,0.00003578397],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"other","genre_scores_codex":[0.01067581,0.04577091,0.4292659,0.4194523,0.01728451,0.0004203949,0.01253622,0.01078179,0.05381214],"genre_scores_gemma":[0.06012106,0.04079767,0.789661,0.03694231,0.005244247,0.00129831,0.02540585,0.002980419,0.03754907],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.03332816,"threshold_uncertainty_score":0.1762583,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1111170845217439,"score_gpt":0.2712400970769773,"score_spread":0.1601230125552334,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}