{"id":"W3198128528","doi":"10.1038/s41467-021-25694-1","title":"The gut microbiome in konzo","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"Cassava research and cyanide","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"National Institute of Environmental Health Sciences; National Institute of General Medical Sciences; Fogarty International Center; National Institutes of Health","keywords":"Microbiome; Gut microbiome; MEDLINE; Computational biology; Biology; Bioinformatics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001587662,0.0002006232,0.0001872794,0.0004482483,0.0008733619,0.0007745768,0.0001035375,0.0002404321,0.0008540252],"category_scores_gemma":[0.0005014383,0.0001250242,0.000121376,0.0004199008,0.000514897,0.0003461633,0.0007116775,0.0002314374,0.00009442677],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005622347,"about_ca_system_score_gemma":0.0003660641,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01595902,"about_ca_topic_score_gemma":0.02623591,"domain_scores_codex":[0.9998707,0.0000386864,0.000006561223,0.00003580378,0.00001178543,0.00003645953],"domain_scores_gemma":[0.999873,0.00001591183,0.00005835656,0.000007866416,0.00001474274,0.00002992849],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009781322,0.00006219175,0.9331514,0.0002095649,0.0001718309,0.002367576,0.0053478,0.0002518274,0.03861657,0.000804572,0.0007069108,0.01733172],"study_design_scores_gemma":[0.000009062661,0.0001413953,0.986782,0.0001751131,0.0000782005,0.00182424,0.004770967,0.0001867142,0.001998581,0.0003510645,0.003664847,0.00001775101],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973335,0.001300455,0.0001550713,0.0001620294,0.000005854753,0.000005477988,0.0003341249,0.000003285422,0.0007001084],"genre_scores_gemma":[0.9984844,0.0007167482,0.0002086741,0.0001323355,0.000005167464,0.000007854713,0.00015695,0.000003097716,0.0002848078],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01595902,"threshold_uncertainty_score":0.03173226,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02832659922588438,"score_gpt":0.2979360811138378,"score_spread":0.2696094818879534,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}