{"id":"W3198128528","doi":"10.1038/s41467-021-25694-1","title":"The gut microbiome in konzo","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"Cassava research and cyanide","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"National Institute of Environmental Health Sciences; National Institute of General Medical Sciences; Fogarty International Center; National Institutes of Health","keywords":"Microbiome; Gut microbiome; MEDLINE; Computational biology; Biology; Bioinformatics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002054776,0.00004080444,0.00004685293,0.00000494119,0.0004032017,0.00008045611,0.000799664,0.00009086727,0.00007510575],"category_scores_gemma":[0.0002289525,0.00001304338,0.00004199506,0.0005214346,0.00008029179,0.00003670684,0.0003437854,0.0005216644,0.00004583668],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002427625,"about_ca_system_score_gemma":0.00001922273,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008717673,"about_ca_topic_score_gemma":0.05084869,"domain_scores_codex":[0.9994303,0.0001511214,0.00008943644,0.0000887428,0.00008564968,0.0001547649],"domain_scores_gemma":[0.99893,0.0006315745,0.00001810072,0.0002917752,0.00009232666,0.00003623661],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000005534916,0.0001055221,0.004750966,7.752814e-7,0.000006789182,0.000004585476,0.00003300151,1.530823e-7,0.9061642,0.01587022,0.01919531,0.05386293],"study_design_scores_gemma":[0.00004199646,0.000008113115,0.160432,0.000005109629,0.000001027935,0.000007901121,0.0002477536,0.00001390143,0.002106013,0.0007149174,0.836378,0.00004332943],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7363058,0.03887616,3.088099e-7,0.2021884,0.0001231541,0.0001863174,0.00005864794,0.00004927677,0.02221191],"genre_scores_gemma":[0.995777,0.002362138,0.0001135916,0.0004597815,0.00003350699,0.00001606993,0.0001012906,3.127304e-7,0.0011363],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9040582,"threshold_uncertainty_score":0.9664708,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02832659922588438,"score_gpt":0.2979360811138378,"score_spread":0.2696094818879534,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}