{"id":"W3198579157","doi":"10.1080/23802359.2021.1923416","title":"Complete chloroplast genome of the mixotrophic chrysophyte <i>Poterioochromonas malhamensis</i> (Ochromonadales, Synurophyceae) from Van Lake in Eastern Anatolia","year":2021,"lang":"en","type":"article","venue":"Mitochondrial DNA Part B","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"Genome; Biology; Gene; Inverted repeat; Chloroplast DNA; Chloroplast; Sensu; Phylogenetics; Botany; Evolutionary biology; Genetics; Genus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00005595323,0.0002769006,0.0003831904,0.0000360153,0.0001286601,0.00003572146,0.0004988228,0.0002196896,0.0002352812],"category_scores_gemma":[0.00005389049,0.0002611338,0.0002438792,0.0002193551,0.0002277486,0.000008617131,0.0005112822,0.0001967347,0.00005663922],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002502395,"about_ca_system_score_gemma":0.0001730782,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001465001,"about_ca_topic_score_gemma":0.002594131,"domain_scores_codex":[0.9981048,0.0002202986,0.000392815,0.0006101135,0.0002906437,0.000381331],"domain_scores_gemma":[0.9987779,0.00002073095,0.0001681354,0.0008081676,0.0001119179,0.0001131405],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00022065,0.0001215638,0.008940412,0.00003086589,0.00009873661,0.0001223678,0.00007692842,0.00009152192,0.989615,0.00003538512,0.0005322695,0.000114329],"study_design_scores_gemma":[0.003049626,0.0002359228,0.1383975,0.0001440924,0.00009509661,0.00006573853,0.00006095997,0.00003902313,0.6718114,0.0003094986,0.1851343,0.0006569232],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948909,0.0009643323,0.0001084696,0.0001814681,0.00128509,0.0003011229,0.001703982,0.000009547278,0.0005550411],"genre_scores_gemma":[0.9967913,0.000107161,0.0003105148,0.0004051701,0.0008732711,0.0000166066,0.0007814395,0.00003092132,0.0006836205],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3178036,"threshold_uncertainty_score":0.9999841,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01231411117796094,"score_gpt":0.2013153047532657,"score_spread":0.1890011935753048,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}