{"id":"W3198850718","doi":"10.1111/1462-2920.15762","title":"Secretome analysis reveals a role of subinhibitory concentrations of polymyxin B in the survival of <scp> <i>Vibrio cholerae</i> </scp> mediated by the type VI secretion system","year":2021,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Vibrio cholerae; Biology; Microbiology; Type VI secretion system; Virulence; Polymyxin B; Escherichia coli; Secretion; Legionella pneumophila; Pathogen; Dictyostelium discoideum; Bacteria; Gene; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003729241,0.0001285321,0.0003276753,0.00004237567,0.00004537875,0.000004489755,0.0002281961,0.0001393692,0.00002288164],"category_scores_gemma":[0.00009840264,0.0000920708,0.000131458,0.0002670332,0.0004536413,0.000004062771,0.0001700152,0.0001021113,0.000002969907],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003717385,"about_ca_system_score_gemma":0.00004691557,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005837929,"about_ca_topic_score_gemma":0.0000805704,"domain_scores_codex":[0.9983665,0.0006729935,0.0003969475,0.0002522186,0.00009635869,0.0002150062],"domain_scores_gemma":[0.9992156,0.0001497294,0.0002281377,0.0003519863,0.00002918438,0.00002535667],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002428306,0.00009285888,0.04461042,0.00002072783,0.0003359587,0.000001153186,0.0003562977,0.00002138931,0.9542534,0.00001792931,0.0002551229,0.00001043873],"study_design_scores_gemma":[0.0004396136,0.0002020203,0.04713405,0.00001267149,0.0001038784,0.00001243067,0.004400375,0.00001777409,0.9454226,0.000002399218,0.002203848,0.00004834135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942138,0.004380965,0.00002198827,0.00005514609,0.00005470159,0.000205714,0.0008891333,0.000002165753,0.0001763762],"genre_scores_gemma":[0.9971444,0.0005011646,0.0000169941,0.00004394931,0.00003030422,0.00001436261,0.002151247,0.000008981711,0.00008856741],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008830821,"threshold_uncertainty_score":0.3754538,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004920798436939404,"score_gpt":0.2096265849206132,"score_spread":0.2047057864836738,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}