{"id":"W3199521318","doi":"10.7554/elife.69249.sa1","title":"Decision letter: A population-level invasion by transposable elements triggers genome expansion in a fungal pathogen","year":2021,"lang":"en","type":"peer-review","venue":"","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Transposable element; Genome; Biology; Pathogen; Population; Genetics; Fungal pathogen; Evolutionary biology; Computational biology; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008282918,0.0007152593,0.002313999,0.001392231,0.004355629,0.008415492,0.003245633,0.03838022,0.0763154],"category_scores_gemma":[0.06584673,0.0008877783,0.001764554,0.0008329013,0.002366545,0.003021915,0.002386692,0.01521603,0.05503484],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003842798,"about_ca_system_score_gemma":0.008819667,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003003597,"about_ca_topic_score_gemma":0.007028625,"domain_scores_codex":[0.9901152,0.001486202,0.0008714616,0.0007440423,0.005182929,0.001600223],"domain_scores_gemma":[0.9473766,0.01561504,0.001984876,0.002148345,0.02066686,0.01220825],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001140593,0.00003555431,0.0001124499,0.00007987745,0.00001151907,0.0003450676,0.0000207373,0.00003167781,0.000168983,0.0009148828,0.9926312,0.005534147],"study_design_scores_gemma":[0.0002112891,0.00007921249,0.001288551,0.000209296,0.00002657102,0.0003599385,0.0001095623,0.0006576554,0.0006075208,0.00377254,0.9926259,0.0000519908],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"other","genre_scores_codex":[0.00135924,0.0009411323,0.0005916183,0.57217,0.392215,0.0003409571,0.001224176,0.0004595548,0.0306982],"genre_scores_gemma":[0.01949221,0.002398227,0.002363374,0.4354729,0.2515737,0.0005077548,0.001298756,0.0005089545,0.2863842],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.0763154,"threshold_uncertainty_score":0.2553005,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0242683813833369,"score_gpt":0.2696026586001896,"score_spread":0.2453342772168527,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}