{"id":"W3199844566","doi":"10.20944/preprints202109.0322.v1","title":"Grapevine Virology in the Third-Generation Sequencing Era: From Virus Detection to Viral Epitranscriptomics","year":2021,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke; Agriculture and Agri-Food Canada","funders":"","keywords":"Minion; Nanopore sequencing; DNA sequencing; Biology; Plant virus; Virology; Wine; Nanopore; RNA virus; Virus; RNA; Computational biology; Biotechnology; DNA; Genetics; Gene; Nanotechnology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001961994,0.0006049469,0.000829526,0.0007070124,0.0003157619,0.002193514,0.000464158,0.00128601,0.001377578],"category_scores_gemma":[0.001291594,0.0003983564,0.0005323213,0.0006403365,0.000896973,0.001596925,0.001057791,0.001960059,0.001086627],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008055008,"about_ca_system_score_gemma":0.0007277504,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000944332,"about_ca_topic_score_gemma":0.001476198,"domain_scores_codex":[0.9992657,0.0001599933,0.00003023825,0.0002181739,0.0002746609,0.00005113005],"domain_scores_gemma":[0.9991311,0.0003352331,0.00006341941,0.0001038058,0.0002269928,0.0001394055],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003093449,0.00005322557,0.00298649,0.003180142,0.0001237963,0.0004258302,0.0007626883,0.0014422,0.720566,0.01526527,0.01126029,0.2436247],"study_design_scores_gemma":[0.00002939026,0.0006656753,0.009130612,0.0008092993,0.0001618278,0.002550141,0.0005840848,0.006089772,0.4217175,0.02191704,0.5361916,0.0001529335],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.1675014,0.5032343,0.2689114,0.01325648,0.005702374,0.0002314092,0.003052466,0.002619074,0.03549121],"genre_scores_gemma":[0.3073584,0.3878091,0.2615163,0.00564016,0.002576964,0.0002378384,0.00616232,0.0008958302,0.02780301],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002193514,"threshold_uncertainty_score":0.0103761,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1956441119455569,"score_gpt":0.3241476314938161,"score_spread":0.1285035195482592,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}