{"id":"W3199915995","doi":"10.1101/2021.09.14.460234","title":"Characterization of the microbiota associated with 12-week-old bovine fetuses exposed to divergent <i>in utero</i> nutrition","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"North Dakota State University; National Science Foundation","keywords":"Biology; Amniotic fluid; Fetus; Stenotrophomonas; Microbiome; Gestation; Ruminococcus; Microbiology; Gut flora; Operational taxonomic unit; Placenta; Proteobacteria; Physiology; Andrology; Pregnancy; Bacteria; Immunology; Feces; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001915719,0.0002041519,0.0002704835,0.0003843003,0.0002235421,0.0005441243,0.0001558454,0.000276799,0.0005652978],"category_scores_gemma":[0.0003346181,0.0001702108,0.000158869,0.0002259595,0.0002649318,0.000149621,0.0002315758,0.0003798147,0.0001958464],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002934721,"about_ca_system_score_gemma":0.0001869144,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006507755,"about_ca_topic_score_gemma":0.004810777,"domain_scores_codex":[0.9998431,0.00001763899,0.000009335834,0.00005447635,0.00004065401,0.00003481014],"domain_scores_gemma":[0.9997374,0.00003526246,0.00009994608,0.00001374972,0.00005107337,0.00006240857],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002523342,0.00001287146,0.020121,0.00004183561,0.00001036542,0.000168154,0.0002397413,0.0000200851,0.9770555,0.0000171836,0.00001619181,0.002044811],"study_design_scores_gemma":[0.000006080811,0.0004560119,0.8676258,0.00003284241,0.00005006809,0.0008768142,0.001117722,0.0003449607,0.1278464,0.00004404257,0.001585536,0.00001365815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976675,0.0007773765,0.0007166939,0.00001606676,0.000005136053,0.000008550963,0.0003898694,0.000008592653,0.0004102325],"genre_scores_gemma":[0.9967234,0.0006592441,0.001051607,0.00004806339,0.000004374754,0.00002058468,0.0006796786,0.00001254628,0.0008004249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006507755,"threshold_uncertainty_score":0.01293975,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01131489791084371,"score_gpt":0.2003568635578479,"score_spread":0.1890419656470042,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}