{"id":"W3200163524","doi":"10.1158/0008-5472.can-21-0761","title":"Diverse Oncogenic Fusions and Distinct Gene Expression Patterns Define the Genomic Landscape of Pediatric Papillary Thyroid Carcinoma","year":2021,"lang":"en","type":"article","venue":"Cancer Research","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"University Health Network; Hospital for Sick Children; Ontario Institute for Cancer Research; University of Toronto","funders":"National Cancer Institute","keywords":"Thyroid carcinoma; Transcriptome; Gene; Fusion gene; Exome sequencing; Exome; Gene expression; Thyroid; Candidate gene; Gene expression profiling","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000896483,0.00009835137,0.0001846833,0.000543242,0.0001492602,0.0003737999,0.00008735518,0.0001380513,0.0005796915],"category_scores_gemma":[0.0003496607,0.0001059541,0.0001322171,0.0005934264,0.00023193,0.0001881871,0.0002524759,0.0001317094,0.0001049139],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000205232,"about_ca_system_score_gemma":0.0001371356,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001315565,"about_ca_topic_score_gemma":0.001733125,"domain_scores_codex":[0.9998958,0.000008871279,0.000008822242,0.00002843735,0.00002774122,0.00003026479],"domain_scores_gemma":[0.9998752,0.00003790236,0.00004166112,0.00000940386,0.00001860551,0.00001722821],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003933526,0.00001681699,0.6499392,0.00006803033,0.00005666502,0.002668935,0.0007277407,0.0009982045,0.3240706,0.0003989856,0.0002534282,0.02040805],"study_design_scores_gemma":[0.000003918819,0.00004336569,0.9833698,0.000005159131,0.00003314537,0.004878058,0.0004514823,0.0008646768,0.009159412,0.0002024051,0.0009828816,0.000005769836],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998888,0.000209255,0.000385427,0.00001307609,4.543892e-7,0.000003053956,0.0002169155,0.00001021823,0.0002736907],"genre_scores_gemma":[0.998872,0.0002326643,0.0003934323,0.00001533977,0.000001858669,0.00000581848,0.0003934244,0.00000652245,0.00007894435],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001315565,"threshold_uncertainty_score":0.002615869,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06028638502116663,"score_gpt":0.3454165414276917,"score_spread":0.2851301564065251,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}