{"id":"W3200352208","doi":"10.1002/ijc.33808","title":"A transcriptome‐wide association study identifies novel candidate susceptibility genes for prostate cancer risk","year":2021,"lang":"en","type":"article","venue":"International Journal of Cancer","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Cancer Institute; Wellcome Trust; National Human Genome Research Institute; National Institute on Aging; Canadian Institutes of Health Research; Harbin Medical University Cancer Hospital; National Institutes of Health; National Heart, Lung, and Blood Institute; Vetenskapsrådet; Cancer Research UK; Swedish Cancer Foundation; U.S. Department of Defense","keywords":"Prostate cancer; Biology; DNA methylation; Candidate gene; Prostate; CpG site; Transcriptome; Gene; Genome-wide association study; Cancer; Genetics; Genotype; Gene expression; Single-nucleotide polymorphism","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006092908,0.0001321766,0.0003234716,0.0001512053,0.00007855929,0.0001005643,0.0001547025,0.00005445784,0.0003483609],"category_scores_gemma":[0.0003855416,0.0001017749,0.0002391558,0.0001465858,0.00003276833,0.0002322555,0.00002822605,0.0002416518,0.00000179515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001426832,"about_ca_system_score_gemma":0.001196095,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0010952,"about_ca_topic_score_gemma":0.004597506,"domain_scores_codex":[0.9980023,0.0000618699,0.0005126316,0.0002139366,0.000981553,0.0002276995],"domain_scores_gemma":[0.9955705,0.0002000202,0.0004682009,0.0001103415,0.003535414,0.0001155522],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002730997,0.0007633785,0.9392957,0.00004574747,0.003582255,0.0001172343,0.00176014,0.0001463362,0.03490159,0.00000509968,0.003066701,0.0135848],"study_design_scores_gemma":[0.02160826,0.0007005654,0.8472198,0.0004063212,0.001301145,0.00003037891,0.002041647,0.0001288283,0.08269641,0.0003790882,0.04326069,0.0002268236],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9748499,0.01156725,0.0003730314,0.009721905,0.002288522,0.0005302004,0.0006140268,0.00001037952,0.00004478978],"genre_scores_gemma":[0.9825186,0.01110508,0.0001773365,0.0003042137,0.0008464385,0.0001412724,0.0000294721,0.00002112345,0.004856449],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09207588,"threshold_uncertainty_score":0.4150258,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02900692316184475,"score_gpt":0.3923312649206369,"score_spread":0.3633243417587921,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}