{"id":"W3200352208","doi":"10.1002/ijc.33808","title":"A transcriptome‐wide association study identifies novel candidate susceptibility genes for prostate cancer risk","year":2021,"lang":"en","type":"article","venue":"International Journal of Cancer","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Cancer Institute; Wellcome Trust; National Human Genome Research Institute; National Institute on Aging; Canadian Institutes of Health Research; Harbin Medical University Cancer Hospital; National Institutes of Health; National Heart, Lung, and Blood Institute; Vetenskapsrådet; Cancer Research UK; Swedish Cancer Foundation; U.S. Department of Defense","keywords":"Prostate cancer; Biology; DNA methylation; Candidate gene; Prostate; CpG site; Transcriptome; Gene; Genome-wide association study; Cancer; Genetics; Genotype; Gene expression; Single-nucleotide polymorphism","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005778442,0.0002429026,0.000521694,0.0006290484,0.000288357,0.000409122,0.0002079868,0.0003132471,0.002485228],"category_scores_gemma":[0.001285555,0.000195234,0.0004915534,0.001142257,0.0002767668,0.0001177565,0.0002438354,0.0004385288,0.0002623081],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001739636,"about_ca_system_score_gemma":0.0003362148,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000821378,"about_ca_topic_score_gemma":0.00135632,"domain_scores_codex":[0.999693,0.00008958822,0.00001559364,0.0001114674,0.00005285534,0.00003745164],"domain_scores_gemma":[0.9993982,0.0002645512,0.000172581,0.00007291677,0.00002677849,0.00006482099],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007137578,0.0001126118,0.886824,0.0001705116,0.001189143,0.001155498,0.0001952309,0.0008817386,0.07941467,0.0005773819,0.0009779872,0.02778743],"study_design_scores_gemma":[0.00002615736,0.00007069719,0.9943753,0.00001142165,0.0003077628,0.0008102498,0.00005393408,0.001474763,0.001578477,0.0004932578,0.0007884612,0.000009378463],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993189,0.001615438,0.003432018,0.0002027098,0.0000186855,0.000009005988,0.0007624857,0.00006910048,0.0007016638],"genre_scores_gemma":[0.9971662,0.0007019778,0.001254357,0.00003791622,0.00001879439,0.00001445404,0.0005825319,0.000009890658,0.0002138717],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002485228,"threshold_uncertainty_score":0.008313894,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02900692316184475,"score_gpt":0.3923312649206369,"score_spread":0.3633243417587921,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}