{"id":"W3200666290","doi":"10.1021/acs.jproteome.1c00408","title":"Proximity Interactome Map of the Vac14–Fig4 Complex Using BioID","year":2021,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity; University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"COPI; Endosome; Interactome; Biology; Cell biology; Golgi apparatus; Syntaxin; Vesicular Transport Proteins; Membrane protein; Biochemistry; Endoplasmic reticulum; Secretory pathway; Membrane","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002834466,0.00143211,0.001117782,0.004286136,0.001576105,0.0009738086,0.001067997,0.0008175381,0.05839328],"category_scores_gemma":[0.0003808264,0.0005774859,0.001083998,0.003411391,0.0003222834,0.001103332,0.001168728,0.001523403,0.01380668],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008923482,"about_ca_system_score_gemma":0.0009495002,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003072983,"about_ca_topic_score_gemma":0.006064882,"domain_scores_codex":[0.9996715,0.00002270602,0.00001599122,0.000121011,0.0000974641,0.00007137505],"domain_scores_gemma":[0.999788,0.00007207316,0.00002724466,0.00002873891,0.00003353254,0.00005048273],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00124234,0.0001956145,0.001616539,0.001695678,0.0001541161,0.0006169591,0.000248983,0.0003730429,0.9329094,0.003871161,0.03329182,0.02378437],"study_design_scores_gemma":[0.0003054748,0.0004801454,0.05842552,0.0004724716,0.0002923022,0.003782804,0.0004992874,0.0117002,0.6022221,0.003113715,0.3185019,0.0002038618],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.3704925,0.01697981,0.1577077,0.005511427,0.001480467,0.0007226892,0.3423567,0.01981804,0.0849307],"genre_scores_gemma":[0.2784181,0.009448975,0.2045098,0.001043528,0.0003495366,0.001500673,0.4228918,0.005789386,0.07604831],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05839328,"threshold_uncertainty_score":0.1953449,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1336218023887494,"score_gpt":0.4128757573354944,"score_spread":0.279253954946745,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}