{"id":"W3200981700","doi":"10.1111/bjd.20760","title":"Transcriptomic changes during stage progression of mycosis fungoides","year":2021,"lang":"en","type":"article","venue":"British Journal of Dermatology","topic":"Cutaneous lymphoproliferative disorders research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa; University of Alberta","funders":"Faculty of Graduate Studies and Research, University of Alberta; Canadian Institutes of Health Research; Bispebjerg Hospital; Alberta Innovates; Kræftens Bekæmpelse; Canadian Dermatology Foundation","keywords":"Mycosis fungoides; Transcriptome; Laser capture microdissection; Biology; KEGG; Pathology; Cancer research; Lymphoma; Medicine; Gene expression; Gene; Immunology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001102129,0.00009975473,0.0005877162,0.0001904168,0.00007018936,0.00002300757,0.0001062323,0.0001110711,0.0004198155],"category_scores_gemma":[0.0003183938,0.0001069495,0.0001618638,0.0002102537,0.0001453806,0.00007366795,0.00003739588,0.000304143,0.000003284566],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005362017,"about_ca_system_score_gemma":0.0003466167,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001700133,"about_ca_topic_score_gemma":0.0001831432,"domain_scores_codex":[0.998513,0.0001890318,0.0004921989,0.0001431331,0.0003826641,0.0002799868],"domain_scores_gemma":[0.998753,0.00006979553,0.0002301664,0.0001176347,0.0006831248,0.0001463398],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","study_design_scores_codex":[0.001175525,0.0008274469,0.1636835,0.001494839,0.0004603884,0.09439674,0.000870248,0.00000303071,0.6889229,0.00004014051,0.001131219,0.04699396],"study_design_scores_gemma":[0.00277758,0.0001849634,0.02499056,0.0008548208,0.00006030519,0.5048761,0.0008113862,0.00002126162,0.4644641,0.00002910956,0.0008518519,0.00007792047],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9754943,0.02110312,0.00007866328,0.002722273,0.00009876309,0.0001445267,0.00001730169,0.000009711688,0.0003313403],"genre_scores_gemma":[0.9934626,0.005381269,0.0006018113,0.0001191065,0.00005465837,0.000004777699,0.000006618827,0.00002181984,0.000347392],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4104794,"threshold_uncertainty_score":0.4596685,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01715041995036905,"score_gpt":0.3119793124503173,"score_spread":0.2948288924999483,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}