{"id":"W3201808495","doi":"10.1101/2021.09.28.462146","title":"Chromosome-scale genome assembly of the brown anole ( <i>Anolis sagrei</i> ), a model species for evolution and ecology","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; John Templeton Foundation; National Science Foundation","keywords":"Anolis; Biology; Genome; Evolutionary biology; Ecology; Lizard; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003327784,0.0003587918,0.0003195596,0.0008784989,0.0004402142,0.0005906972,0.0003576209,0.0005312081,0.001966473],"category_scores_gemma":[0.0004666674,0.0002328018,0.0005369674,0.000357452,0.0002797081,0.0003611035,0.0007041496,0.0007615504,0.001249798],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003470712,"about_ca_system_score_gemma":0.0002816082,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002999385,"about_ca_topic_score_gemma":0.006971116,"domain_scores_codex":[0.999856,0.0000142905,0.000008974602,0.000067219,0.00003874778,0.00001477586],"domain_scores_gemma":[0.9996535,0.00007771139,0.00006038177,0.00007185347,0.00007486843,0.00006176106],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001456701,0.00002912864,0.003395018,0.0001098057,0.00005306421,0.0003186386,0.0001935444,0.001157378,0.9817847,0.0006786276,0.001206983,0.01092746],"study_design_scores_gemma":[0.00007435316,0.000540801,0.1675619,0.0001555166,0.0003007371,0.003109627,0.0005142339,0.02184482,0.6671188,0.001389683,0.1372198,0.0001697987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8852012,0.002288347,0.08524212,0.0007631575,0.0003360269,0.0001679345,0.0154268,0.002367921,0.008206544],"genre_scores_gemma":[0.7018803,0.001535019,0.2044699,0.0002760548,0.0000876758,0.0001418632,0.0762403,0.001384246,0.01398454],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002999385,"threshold_uncertainty_score":0.006578505,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01097764387775491,"score_gpt":0.197842091901121,"score_spread":0.1868644480233661,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}