{"id":"W3203431640","doi":"10.1101/2021.10.01.462481","title":"Prevalence, persistence, and genetics of antibody responses to protein toxins and virulence factors","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Inflammatory Myopathies and Dermatomyositis","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital","funders":"National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Michael Smith Health Research BC; Cure JM Foundation; National Institute of Allergy and Infectious Diseases; Johns Hopkins University; Frank H. and Eva B. Buck Foundation; National Institute of Environmental Health Sciences; Leona M. and Harry B. Helmsley Charitable Trust","keywords":"Biology; Virulence; Flagellin; Immune system; Virulence factor; Antibody; Microbiology; Genetics; Computational biology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003678472,0.0001838554,0.0001799135,0.0006265942,0.0001735072,0.0004285502,0.000150237,0.0002886009,0.002056045],"category_scores_gemma":[0.0005250881,0.0001456728,0.0002015555,0.0004734437,0.0001906775,0.0001350811,0.0003506723,0.0002882712,0.000251222],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001846104,"about_ca_system_score_gemma":0.00009107564,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001061522,"about_ca_topic_score_gemma":0.00111743,"domain_scores_codex":[0.9996465,0.00006445443,0.00002008416,0.0001550156,0.00006514644,0.00004866069],"domain_scores_gemma":[0.9996407,0.00009174897,0.0001494571,0.00003441765,0.00003532845,0.0000483811],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005369945,0.00009536841,0.7324191,0.00007977506,0.0002576038,0.0002463095,0.0001748472,0.0006492642,0.2540439,0.0002477388,0.0004815275,0.01076762],"study_design_scores_gemma":[0.000006801631,0.0001532655,0.9897935,0.00001051623,0.00004710954,0.0004986036,0.000114339,0.001056566,0.007378371,0.0001179143,0.0008158494,0.000007217018],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973907,0.0001967858,0.0009703659,0.00002239176,0.000003177863,0.000004457045,0.001075718,0.00001622684,0.0003202192],"genre_scores_gemma":[0.9981537,0.0001017042,0.0006155689,0.00003309824,0.000003378259,0.000009374759,0.0006496615,0.00001096043,0.0004225896],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002056045,"threshold_uncertainty_score":0.006878138,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01724428174749787,"score_gpt":0.244027343657494,"score_spread":0.2267830619099961,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}