{"id":"W3203608829","doi":"10.1016/j.fm.2021.103915","title":"Associations between Listeria monocytogenes genomic characteristics and adhesion to polystyrene at 8 °C","year":2021,"lang":"en","type":"article","venue":"Food Microbiology","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Universität Zürich; Public Health Agency of Canada","keywords":"Listeria monocytogenes; Genotype; Biology; Microbiology; Genotyping; Virulence; Multilocus sequence typing; Genetics; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001408552,0.0002442143,0.0003789529,0.00005186657,0.0001803182,0.00003183044,0.0002073804,0.0003528368,0.00003801135],"category_scores_gemma":[0.0001119513,0.0002660607,0.00009375282,0.00009263208,0.00007488894,0.000003564018,0.001222067,0.00007018423,0.00005897665],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009373791,"about_ca_system_score_gemma":0.0001008408,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008156656,"about_ca_topic_score_gemma":0.0001272563,"domain_scores_codex":[0.9983694,0.0001654118,0.0003990911,0.000645034,0.00003555291,0.0003854975],"domain_scores_gemma":[0.9990581,0.00003120718,0.0001494129,0.0004987924,0.0001170909,0.0001454473],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007145705,0.00002266514,0.03468136,0.000009657286,0.0001523129,0.000004164726,0.00006031829,9.427276e-7,0.9631608,0.0000208073,0.0007301891,0.001085334],"study_design_scores_gemma":[0.0004171858,0.0005094754,0.102573,0.000007360521,0.00005401262,0.0001067631,0.00001435683,2.685063e-7,0.8153001,0.0000166169,0.08070507,0.0002958067],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944985,0.001211931,0.0001951343,0.0003991554,0.0004882286,0.0001978103,0.002863649,0.00002238834,0.0001232391],"genre_scores_gemma":[0.9912949,0.000166744,0.001527578,0.0008759328,0.0005156003,0.00001880161,0.004793943,0.00004376114,0.000762754],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1478607,"threshold_uncertainty_score":0.9999791,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05616966246996696,"score_gpt":0.2957947422030199,"score_spread":0.239625079733053,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}