{"id":"W3204065639","doi":"10.3389/fcimb.2021.709372","title":"Microbiome Compositions From Infertile Couples Seeking In Vitro Fertilization, Using 16S rRNA Gene Sequencing Methods: Any Correlation to Clinical Outcomes?","year":2021,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Genomics","funders":"","keywords":"Biology; Gardnerella vaginalis; Lactobacillus gasseri; Lactobacillus; Prevotella; Ruminococcus; Microbiology; Lactobacillus crispatus; Bacteroidetes; Firmicutes; Haemophilus; Microbiome; Peptostreptococcus; Bacteroides thetaiotaomicron; Ureaplasma; Bacteroides; Bacterial vaginosis; 16S ribosomal RNA; Genetics; Mycoplasma; Bacteria; Feces","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004145889,0.0002035921,0.0003395692,0.0006477371,0.0003448663,0.000413749,0.0001129881,0.0003156342,0.00118643],"category_scores_gemma":[0.001405956,0.0001294254,0.000242506,0.0006782535,0.0002164801,0.0001637077,0.0003157853,0.0001838957,0.0001494115],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001230234,"about_ca_system_score_gemma":0.0001652111,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009783356,"about_ca_topic_score_gemma":0.001677501,"domain_scores_codex":[0.9997284,0.00007883831,0.0000311398,0.00006019833,0.00006049062,0.00004093934],"domain_scores_gemma":[0.9996595,0.00008332131,0.0001346349,0.00001257208,0.00004762651,0.00006222637],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002468396,0.00003252915,0.9831523,0.0001142216,0.00007575275,0.0001765044,0.0004934875,0.00004178196,0.004805985,0.00001854707,0.0001210857,0.01072094],"study_design_scores_gemma":[0.000005964016,0.0002890114,0.996578,0.0000390573,0.00007424565,0.0008309177,0.0007979883,0.0001619485,0.0006602175,0.00006266597,0.0004934044,0.000006629222],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976477,0.00163998,0.0001982718,0.00006258075,0.000007597809,0.000010058,0.0002784954,0.000002346864,0.00015289],"genre_scores_gemma":[0.9985549,0.0006074475,0.0003641094,0.00006558812,0.00001456109,0.00001417738,0.0002862071,0.000001431286,0.00009168113],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00118643,"threshold_uncertainty_score":0.003969014,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04618078272662948,"score_gpt":0.3553763551341887,"score_spread":0.3091955724075592,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}