{"id":"W3204147579","doi":"10.1128/aac.00966-21","title":"A One-Health Genomic Investigation of Gentamicin Resistance in Salmonella from Human and Chicken Sources in Canada, 2014 to 2017","year":2021,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Provincial Laboratory of Public Health; Queen Elizabeth II Health Sciences Centre; University of Alberta; Ste. Anne's Hospital; BC Centre for Disease Control; Horizon Health Network; University of Guelph; Public Health Ontario; Public Health Agency of Canada; Toronto Public Health; University of Manitoba","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Spectinomycin; Salmonella enterica; Salmonella; Gentamicin; Serotype; Plasmid; Antibiotic resistance; Integron","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002272203,0.0003001673,0.0002394142,0.00255284,0.001641124,0.0007321774,0.0003942489,0.0003597533,0.001603738],"category_scores_gemma":[0.0005974695,0.0002394096,0.0003567599,0.003350837,0.0004424525,0.0001290173,0.000636631,0.000403872,0.0002795775],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.009459486,"about_ca_system_score_gemma":0.01681636,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.972739,"about_ca_topic_score_gemma":0.9859876,"domain_scores_codex":[0.9996051,0.00001627477,0.00001816247,0.00007483732,0.0001350442,0.0001506806],"domain_scores_gemma":[0.9993442,0.00002062298,0.00005757387,0.00001623522,0.0004069404,0.0001545224],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002982795,0.00006331566,0.9551624,0.0001937053,0.0001000333,0.001464738,0.00261979,0.0001984521,0.01199286,0.0004099034,0.004029785,0.0234667],"study_design_scores_gemma":[0.000003756931,0.00003555609,0.9925842,0.00003678994,0.0000212421,0.0003297327,0.002261051,0.00008531757,0.0005643034,0.00001801953,0.004055055,0.000004999126],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9689752,0.001647821,0.0006605174,0.0005795808,0.00003334437,0.0001546552,0.02283202,0.0000307533,0.005086131],"genre_scores_gemma":[0.9768703,0.001644028,0.0009967753,0.0003879576,0.00001177514,0.00004069832,0.0130475,0.00001156659,0.006989507],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02726102,"threshold_uncertainty_score":0.06863368,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02479945154345448,"score_gpt":0.2357679838504482,"score_spread":0.2109685323069937,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}