{"id":"W3205620409","doi":"10.15252/msb.202110387","title":"COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms","year":2021,"lang":"en","type":"article","venue":"Molecular Systems Biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":true,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto; Ontario Institute for Cancer Research","funders":"Bundesministerium für Bildung und Forschung; Association Nationale de la Recherche et de la Technologie; National Institute of General Medical Sciences; Horizon 2020 Framework Programme; ZonMw; Biotechnology and Biological Sciences Research Council; H2020 Marie Skłodowska-Curie Actions; National Human Genome Research Institute; Fonds National de la Recherche Luxembourg; Deutsches Zentrum für Infektionsforschung; H2020 LEIT Information and Communication Technologies; European Commission","keywords":"Interoperability; Data science; Computer science; Representation (politics); Resource (disambiguation); Computational model; Perspective (graphical); Biology; Computational biology; World Wide Web; Artificial intelligence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005630409,0.002090586,0.002086714,0.01815589,0.001230433,0.007134178,0.005442914,0.002784255,0.01268001],"category_scores_gemma":[0.0197911,0.001222932,0.003800869,0.01070979,0.0009403751,0.006063746,0.005337104,0.0028907,0.005417801],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002112575,"about_ca_system_score_gemma":0.006859405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007820105,"about_ca_topic_score_gemma":0.01241077,"domain_scores_codex":[0.9981046,0.0004544746,0.0003131778,0.0004982965,0.0005273464,0.0001021197],"domain_scores_gemma":[0.9897915,0.004865405,0.0009240517,0.002685872,0.0010767,0.0006565105],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0008643243,0.0005113154,0.02454893,0.01438805,0.002572615,0.002760077,0.001449612,0.1164679,0.01178686,0.2020658,0.3462296,0.2763549],"study_design_scores_gemma":[0.0002752897,0.0001402964,0.005100082,0.001908847,0.0009248381,0.00119401,0.0004532954,0.1372564,0.007207907,0.1678749,0.677358,0.0003060185],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.01268609,0.009108342,0.4763833,0.005445216,0.0008229276,0.0009063231,0.3993027,0.07241435,0.0229307],"genre_scores_gemma":[0.07343157,0.01079739,0.4665844,0.001025161,0.0002715743,0.001121066,0.4386571,0.004818936,0.003292883],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01815589,"threshold_uncertainty_score":0.04241878,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006832483697214791,"score_gpt":0.2423652035600461,"score_spread":0.2355327198628313,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}