{"id":"W3208229326","doi":"10.3389/fvets.2021.742345","title":"Serotypes, Virulence-Associated Factors, and Antimicrobial Resistance of Streptococcus suis Isolates Recovered From Sick and Healthy Pigs Determined by Whole-Genome Sequencing","year":2021,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; University of Guelph","funders":"Ministry of Agriculture, Food and Rural Affairs; Ontario Ministry of Agriculture, Food and Rural Affairs; Swine Innovation Porc; Canada First Research Excellence Fund; University of Guelph","keywords":"Streptococcus suis; Biology; Serotype; Virulence; Microbiology; Gene; Virology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001867113,0.0002639651,0.0003106419,0.0008040369,0.000234445,0.0003050678,0.0001141167,0.0002401057,0.0007356398],"category_scores_gemma":[0.0004265196,0.0001527315,0.0003757086,0.000734147,0.0003258708,0.0001188266,0.0001844876,0.0001732467,0.0001701108],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002639108,"about_ca_system_score_gemma":0.0002933177,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01038577,"about_ca_topic_score_gemma":0.01486649,"domain_scores_codex":[0.9998025,0.00002048254,0.00002030966,0.00005339999,0.00005301101,0.00005027936],"domain_scores_gemma":[0.9996928,0.0000732915,0.000111457,0.0000235082,0.00004550963,0.00005347133],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005353956,0.00004456529,0.7026609,0.00007883068,0.00007838837,0.000623426,0.0008550802,0.0002519705,0.2889035,0.00003332424,0.0001198099,0.005814756],"study_design_scores_gemma":[0.000002326094,0.00007406052,0.997124,0.000003173792,0.00001599581,0.0002745282,0.0002615979,0.0001155158,0.001962194,0.000005697053,0.0001583504,0.000002471799],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992455,0.00004568709,0.0001088208,0.000006538075,9.789755e-7,0.000004448366,0.0004642635,0.000001873369,0.0001220328],"genre_scores_gemma":[0.9973017,0.00009715057,0.0004058511,0.00002048988,0.000002673755,0.000009433993,0.00186923,0.000003678363,0.0002898699],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01038577,"threshold_uncertainty_score":0.02065063,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02279808818443109,"score_gpt":0.2693677432501063,"score_spread":0.2465696550656752,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}