{"id":"W3208317134","doi":"","title":"Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea","year":2022,"lang":"en","type":"preprint","venue":"QUT ePrints (Queensland University of Technology)","topic":"Methane Hydrates and Related Phenomena","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Archaea; Biology; Euryarchaeota; Metagenomics; Horizontal gene transfer; Candidatus; Phylum; Sulfate-reducing bacteria; Genome; Clade; Haloarchaea; Thaumarchaeota; Evolutionary biology; Bacteria; Phylogenetics; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002047006,0.0002123712,0.0002486781,0.0006559257,0.0002066056,0.0004426354,0.0001264143,0.0002941988,0.0006475307],"category_scores_gemma":[0.0002845722,0.0001156211,0.0002786296,0.0007074202,0.000165971,0.000281811,0.0002627787,0.0002620791,0.0002220538],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002128195,"about_ca_system_score_gemma":0.0002047898,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006924285,"about_ca_topic_score_gemma":0.0008555675,"domain_scores_codex":[0.9999068,0.00001363783,0.000005430524,0.00003460538,0.00001740078,0.0000221133],"domain_scores_gemma":[0.9998989,0.0000402274,0.00001932592,0.00000959215,0.00001356062,0.00001836042],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005296462,0.00004182076,0.01353757,0.0004760703,0.00007191118,0.0002328678,0.0005497106,0.000570354,0.9530402,0.0006848054,0.0003193708,0.02994571],"study_design_scores_gemma":[0.0000565374,0.0006791253,0.8324938,0.0001463507,0.000390393,0.001661922,0.001424417,0.003524229,0.1229058,0.002312285,0.03433703,0.00006808041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.989633,0.005287916,0.001463515,0.0001201762,0.000008064428,0.000007435835,0.001689942,0.00004384647,0.001746264],"genre_scores_gemma":[0.984311,0.004184444,0.004437448,0.00009410067,0.00001818089,0.0000152016,0.005887367,0.00003197065,0.001020219],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006924285,"threshold_uncertainty_score":0.002166271,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01158317246724302,"score_gpt":0.210393748470425,"score_spread":0.198810576003182,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}