{"id":"W3208334201","doi":"10.1093/infdis/jiab547","title":"Vaginal Microbiome Components as Correlates of Cervical Human Papillomavirus Infection","year":2021,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Cancer Research Society","keywords":"Microbiome; Logistic regression; Confidence interval; Receiver operating characteristic; Internal medicine; Human papillomavirus; Stepwise regression; Cervical cancer; Medicine; Biology; Bioinformatics; Cancer","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001638788,0.0003941141,0.0003229093,0.0009778935,0.0002367869,0.000860373,0.000271866,0.0003296467,0.001350756],"category_scores_gemma":[0.008925325,0.0001784953,0.0005007175,0.001072029,0.0003288183,0.0002691995,0.0005831943,0.0003827961,0.0001645326],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002875189,"about_ca_system_score_gemma":0.0004651942,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003062852,"about_ca_topic_score_gemma":0.004301571,"domain_scores_codex":[0.9991603,0.0003529338,0.00007308687,0.0001422964,0.0001717952,0.00009955894],"domain_scores_gemma":[0.9952899,0.001967264,0.001744422,0.0002411673,0.0004068218,0.0003503711],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004284821,0.000007468276,0.9980587,0.00001773955,0.00003557378,0.000009618765,0.00002627477,0.00004371178,0.0001767645,0.000009190894,0.00001811715,0.001553974],"study_design_scores_gemma":[0.000002385188,0.00006315546,0.9985966,0.00002322071,0.00005621665,0.0001212797,0.0001075166,0.0006049032,0.0002174,0.00004853606,0.0001565637,0.000002173268],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960102,0.001622394,0.0005743496,0.0000903453,0.00001043031,0.00002216954,0.0006407141,0.0000131336,0.001016276],"genre_scores_gemma":[0.999155,0.0001929282,0.0003864056,0.000009279383,0.000004822517,0.000008174341,0.000187567,0.000001959535,0.00005387579],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003062852,"threshold_uncertainty_score":0.008666813,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01755981170147442,"score_gpt":0.2995377822078619,"score_spread":0.2819779705063875,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}