{"id":"W3208590696","doi":"10.1038/s41587-021-01058-4","title":"Population genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement","year":2021,"lang":"en","type":"article","venue":"Nature Biotechnology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":287,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; University of British Columbia","funders":"Department of Plant Sciences, University of California, Davis; Agricultural Research Service; National Institute of Food and Agriculture; Directorate for Biological Sciences; Saskatchewan Wheat Development Commission; Deutsches Zentrum für integrative Biodiversitätsforschung Halle-Jena-Leipzig; Universität Zürich; Punjab Agricultural University; Kementerian Riset, Teknologi dan Pendidikan Tinggi; Nanjing Agricultural University; Sichuan Agricultural University; Tel Aviv University; Ilam University; University of British Columbia; Instituto Nacional de Investigación Agropecuaria; Aarhus Universitet; John Innes Foundation; OeAD-GmbH; Chinese Academy of Agricultural Sciences; Innovationsfonden; U.S. Department of Agriculture; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; King Saud University; Leibniz-Gemeinschaft; Research Councils UK; University of California, Davis; ACT Government; National Natural Science Foundation of China; National Science Foundation; UK Research and Innovation; University of Minnesota; King Abdullah University of Science and Technology; Department of Biotechnology, Ministry of Science and Technology, India; International Center for Agricultural Research in the Dry Areas; European Commission; Università di Bologna; Kansas Wheat Commission; Biotechnology and Biological Sciences Research Council; Jewish National Fund; Fulbright Association; Ministry of Agriculture - Saskatchewan; ASEAN-European Academic University Network; Universitas Gadjah Mada; Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria; Österreichische Agentur für Internationale Mobilität und Kooperation in Bildung, Wissenschaft und Forschung; Consejo Nacional de Ciencia y Tecnología; Universität für Bodenkultur Wien; Royal Society","keywords":"Aegilops tauschii; Biology; Aegilops; Population; Genetics; Biotechnology; Gene; Genome; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001469735,0.0002399709,0.0001602147,0.0005421222,0.0001593984,0.0002192367,0.00011303,0.0001577419,0.0009434538],"category_scores_gemma":[0.000134615,0.00008650254,0.0002038973,0.0003615769,0.00008627196,0.000114139,0.0001963674,0.0002763997,0.0001447398],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002893696,"about_ca_system_score_gemma":0.0001587299,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0018371,"about_ca_topic_score_gemma":0.003414242,"domain_scores_codex":[0.9999501,0.000006132373,0.000003560224,0.00002439956,0.000007829807,0.000007958868],"domain_scores_gemma":[0.9999343,0.00001661458,0.00001707563,0.000006757442,0.000009493147,0.00001577879],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000119587,0.00002213363,0.01075709,0.00003491319,0.00002969902,0.00009646868,0.0000704104,0.0002282459,0.9798385,0.0001065371,0.00003662663,0.008659818],"study_design_scores_gemma":[0.00006596625,0.0006027323,0.8601359,0.00002321207,0.0001952967,0.0007618698,0.0005605766,0.003225349,0.1265383,0.0003602284,0.007508192,0.00002246508],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954863,0.0003281295,0.002503794,0.0000452831,0.000005496524,0.00002899971,0.0007031061,0.00003535751,0.0008636088],"genre_scores_gemma":[0.9940941,0.0004195106,0.002977929,0.00005474704,0.000004433362,0.00002061389,0.001505865,0.00001795805,0.0009049762],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0018371,"threshold_uncertainty_score":0.003652751,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008140407058569344,"score_gpt":0.2326295475740512,"score_spread":0.2244891405154819,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}