{"id":"W3209067964","doi":"10.1096/fj.202100857rr","title":"Metagenomic analysis reveals the signature of gut microbiota associated with human chronotypes","year":2021,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research","funders":"Israel Science Foundation","keywords":"Chronotype; Biology; Microbiome; Metagenomics; Obesity; Bioinformatics; Genetics; Circadian rhythm; Endocrinology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005706295,0.0001194883,0.000226226,0.00004033117,0.0003481049,0.00004279214,0.000301619,0.0001038222,0.0001462434],"category_scores_gemma":[0.00004041312,0.00006165593,0.0002186118,0.0002893386,0.0001161453,0.000002389979,0.00006857826,0.0002986407,0.000002578286],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000269511,"about_ca_system_score_gemma":0.0001978572,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001263053,"about_ca_topic_score_gemma":0.0002435019,"domain_scores_codex":[0.9989955,0.0002942344,0.0002448967,0.0001541912,0.00009557253,0.0002155409],"domain_scores_gemma":[0.9990788,0.00002549528,0.0002938811,0.0003574022,0.000193894,0.00005052962],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002386885,0.00003948535,0.001971725,0.000004988448,0.001515896,0.000007187382,0.0001240779,0.000161847,0.9933714,0.0000252573,0.002716002,0.00003824079],"study_design_scores_gemma":[0.0006487021,0.0002017477,0.1108696,0.00003506861,0.001431206,0.0001674757,0.0003541005,0.000007008932,0.8838084,0.00006059602,0.002244952,0.0001711151],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995801,0.002849164,0.0001288179,0.0008100393,0.00004728461,0.00007224466,0.00004827286,0.000002509267,0.0002407221],"genre_scores_gemma":[0.9971221,0.0001927371,0.0001079754,0.0006396415,0.00013882,0.000001004086,0.0001112223,0.00001275831,0.00167372],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.109563,"threshold_uncertainty_score":0.2677377,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00985274383952952,"score_gpt":0.2481925498114538,"score_spread":0.2383398059719243,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}