{"id":"W3209653505","doi":"10.3389/fonc.2021.722436","title":"Intestinal Microbiome in Hematopoietic Stem Cell Transplantation For Autoimmune Diseases: Considerations and Perspectives on Behalf of Autoimmune Diseases Working Party (ADWP) of the EBMT","year":2021,"lang":"en","type":"article","venue":"Frontiers in Oncology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Dr. Rolf M. Schwiete Stiftung; Deutsche Forschungsgemeinschaft; National Institute for Health and Care Research","keywords":"Microbiome; Immunology; Hematopoietic stem cell transplantation; Dysbiosis; Transplantation; Immune system; Stem cell; Context (archaeology); Fecal bacteriotherapy; Medicine; Gut flora; Biology; Bioinformatics; Internal medicine; Antibiotics; Genetics; Clostridium difficile","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005172114,0.0003764125,0.0007130335,0.0007556843,0.0008013605,0.002696692,0.0005842939,0.002317926,0.002924797],"category_scores_gemma":[0.006225867,0.0001124089,0.0004416068,0.0006014139,0.001303422,0.001706779,0.001953584,0.003985947,0.0009924533],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007702131,"about_ca_system_score_gemma":0.002904467,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001348752,"about_ca_topic_score_gemma":0.002184569,"domain_scores_codex":[0.9987067,0.0005740969,0.0001803046,0.0001541931,0.0002736632,0.0001110518],"domain_scores_gemma":[0.9959787,0.001728773,0.0004623026,0.0001570422,0.0009298134,0.000743372],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005693869,0.0001216453,0.01318693,0.002333637,0.0001614415,0.0007465085,0.0006450557,0.0003298901,0.004611911,0.01399917,0.1800512,0.7832432],"study_design_scores_gemma":[0.00006312582,0.0003118501,0.01971128,0.005650004,0.000220644,0.002434724,0.001124182,0.0006512054,0.001616775,0.02083001,0.9472938,0.00009233547],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.005802006,0.6541314,0.002401824,0.3139683,0.01818429,0.00002961962,0.0001926589,0.00005967679,0.005230255],"genre_scores_gemma":[0.08659764,0.7486662,0.008147001,0.08056717,0.06787633,0.000147469,0.0004388822,0.0001046012,0.007454813],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.005172114,"threshold_uncertainty_score":0.02735311,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01425647507096747,"score_gpt":0.2630482994919838,"score_spread":0.2487918244210163,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}