{"id":"W3210182205","doi":"10.3390/microorganisms9112266","title":"Metagenomic Investigation of a Low Diversity, High Salinity Offshore Oil Reservoir","year":2021,"lang":"en","type":"article","venue":"Microorganisms","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Engineering and Physical Sciences Research Council; Natural Resources Canada; Natural Sciences and Engineering Research Council of Canada; Government of the United Kingdom; University of Calgary","keywords":"Metagenomics; Microbiome; Biology; Extreme environment; Salinity; Microbial population biology; Microbial ecology; Microorganism; Ecology; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002406042,0.0001045074,0.0002024256,0.00002110446,0.0003127145,0.000007461017,0.0003895647,0.0001304797,0.01339777],"category_scores_gemma":[0.00004446258,0.0001120037,0.00005699404,0.0002203581,0.0003640639,0.00008751017,0.001908561,0.0002069228,0.0005437092],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008200802,"about_ca_system_score_gemma":0.000036153,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008780884,"about_ca_topic_score_gemma":0.002748102,"domain_scores_codex":[0.9990183,0.0003337426,0.0001818502,0.0002108892,0.00007835159,0.0001768461],"domain_scores_gemma":[0.9993572,0.00007912591,0.00009591813,0.0003846008,0.00002247481,0.0000606697],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001613058,0.00005814691,0.02267505,0.00001890204,0.00002251846,0.000008002796,0.0009389332,0.00007289252,0.9729923,0.000098483,0.00290784,0.0001907821],"study_design_scores_gemma":[0.0003018576,0.00004738852,0.1720456,0.00000777123,0.00002754499,0.00001031324,0.0001061654,0.000004086367,0.8216851,0.004711619,0.0009244008,0.0001280529],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982578,0.0000325174,0.00001627697,0.0004260433,0.0001282031,0.00003453677,0.00003090498,0.00002008106,0.001053636],"genre_scores_gemma":[0.9965279,0.00002674136,0.001357852,0.0007062665,0.0000182131,0.00000101907,0.000126886,0.000009191735,0.001225931],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1513072,"threshold_uncertainty_score":0.9875041,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01576204046833032,"score_gpt":0.2050572745195053,"score_spread":0.189295234051175,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}