{"id":"W3210459476","doi":"10.3390/antibiotics10111282","title":"Molecular Modeling the Proteins from the exo-xis Region of Lambda and Shigatoxigenic Bacteriophages","year":2021,"lang":"en","type":"review","venue":"Antibiotics","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lytic cycle; Lysogenic cycle; Gene; Bacteriophage; Biology; Escherichia coli; RNA polymerase; Lambda phage; Lambda; Shiga toxin; Transcription (linguistics); Genetics; Computational biology; Virus; Physics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001171849,0.0002615304,0.0005619949,0.00001426657,0.0001685799,0.0001004959,0.0004005025,0.0001743969,0.0001628473],"category_scores_gemma":[0.0000360964,0.000147046,0.0002924016,0.0001933216,0.0002074268,0.00008416304,0.0004579005,0.0003666187,0.00004587225],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004531953,"about_ca_system_score_gemma":0.00003613552,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008109338,"about_ca_topic_score_gemma":0.0001891379,"domain_scores_codex":[0.9987598,0.0001764161,0.0003910133,0.0003476522,0.0001291937,0.000195925],"domain_scores_gemma":[0.9989723,0.0001083261,0.0002503357,0.0006132557,0.00001293429,0.00004283143],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00000553461,0.0001622539,0.00005021381,0.001470108,0.0005462537,0.0001465751,0.0008678721,0.0001334912,0.02310708,0.0001777777,0.001034338,0.9722985],"study_design_scores_gemma":[0.000107638,0.00004808859,0.000163856,0.006859161,0.001192501,0.0001991277,0.0001700455,0.0004059606,0.00183748,0.00004112366,0.9884958,0.0004792163],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.02545591,0.9726868,0.0005410835,0.0001800199,0.0002044238,0.0006211147,0.00007388015,0.00001413751,0.0002226382],"genre_scores_gemma":[0.01888998,0.9802317,0.000378593,0.0001189673,0.00006532518,0.000001745937,0.00005608598,0.0000373716,0.000220257],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9874614,"threshold_uncertainty_score":0.599636,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03597517810940479,"score_gpt":0.2798824165262089,"score_spread":0.2439072384168041,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}