{"id":"W3210643297","doi":"10.1158/1055-9965.epi-21-0463","title":"Molecular and Pathology Features of Colorectal Tumors and Patient Outcomes Are Associated with <i>Fusobacterium nucleatum</i> and Its Subspecies <i>animalis</i>","year":2021,"lang":"en","type":"article","venue":"Cancer Epidemiology Biomarkers & Prevention","topic":"Diverticular Disease and Complications","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Lunenfeld-Tanenbaum Research Institute; University Health Network; Ontario Institute for Cancer Research","funders":"National Cancer Institute; National Institutes of Health; Österreichische Forschungsförderungsgesellschaft; Cancer Research UK","keywords":"Fusobacterium nucleatum; Fusobacterium; Subspecies; Medicine; Pathology; Bacteroidaceae; Colorectal cancer; Internal medicine; Biology; Cancer; Bacteria; Genetics; Bacteroides; Zoology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002811701,0.0002094553,0.0002218646,0.000593034,0.0002344989,0.0003626948,0.0002060278,0.0003621774,0.001928177],"category_scores_gemma":[0.0008203955,0.0001413473,0.0003150333,0.00064529,0.0002647924,0.0002268668,0.0003406436,0.0003737304,0.0002046717],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002355442,"about_ca_system_score_gemma":0.0001644296,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001774172,"about_ca_topic_score_gemma":0.00245176,"domain_scores_codex":[0.9998006,0.00003517501,0.00001882256,0.0000641388,0.00003548488,0.00004568811],"domain_scores_gemma":[0.9988926,0.0001148929,0.0006851222,0.00005527219,0.00007944778,0.0001726605],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003152984,0.00001566237,0.9938646,0.00001754912,0.00008775373,0.00007873865,0.00001203577,0.00006143809,0.003835224,0.00001387056,0.00009810759,0.001599678],"study_design_scores_gemma":[0.000003232897,0.00004280588,0.9990469,0.000003639624,0.00003132349,0.000260856,0.00003386783,0.0001649386,0.0002481431,0.00001657147,0.0001453912,0.000002325493],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984685,0.0005681318,0.0001270282,0.00005282685,0.000006182988,0.000004346606,0.0003725732,0.000007218361,0.0003932632],"genre_scores_gemma":[0.9993734,0.0001103177,0.00008745414,0.0000134244,0.000007247338,0.000002499063,0.0003245389,0.000001485511,0.00007975954],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001928177,"threshold_uncertainty_score":0.006450415,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01907433114307187,"score_gpt":0.2864014230060458,"score_spread":0.2673270918629739,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}